RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 MFAP4P55083 255 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 UCP2P55851 309 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 UFM1P61960 85 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 RPP38P78345 283 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 MRPS15P82914 257 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 XIAPP98170 497 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TIAL1Q01085 375 aaKnown RBP eCLIP4.13□□□□□ -1.75
VPS41-212ENST00000482217 SP2Q02086 613 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TRAF1Q13077 416 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 LCP2Q13094 533 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 BAATQ14032 418 aaPredicted RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 GAMTQ14353 236 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 PTPRRQ15256 657 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 GPR162Q16538 588 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 AANATQ16613 207 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 PTCHD3Q3KNS1 767 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 EPC2Q52LR7 807 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ZNF766Q5HY98 468 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ZNF618Q5T7W0 954 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 MANEALQ5VSG8 457 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 STRIP1Q5VSL9 837 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 PRAMEF20Q5VT98 475 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 DAB2IPQ5VWQ8 1189 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 NAA35Q5VZE5 725 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 DEGS2Q6QHC5 323 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SERPINA13PQ6UXR4 307 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ZNF813Q6ZN06 617 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 MTSS1LQ765P7 747 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TRAPPC11Q7Z392 1133 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TMCO2Q7Z6W1 182 aaPredicted RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 SERPINA12Q8IW75 414 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 EFCAB13Q8IY85 973 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SRRM1Q8IYB3 904 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 IZUMO1Q8IYV9 350 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 KDM8Q8N371 416 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TCAIMQ8N3R3 496 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 LCORLQ8N3X6 602 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ENDOVQ8N8Q3 282 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 L3MBTL4Q8NA19 623 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 IQUBQ8NA54 791 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 CAMKVQ8NCB2 501 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 OR2T3Q8NH03 318 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ZCCHC10Q8TBK6 192 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 MYCBPAPQ8TBZ2 947 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 GRAPLQ8TC17 118 aaPredicted RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 OSCP1Q8WVF1 389 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ATG4AQ8WYN0 398 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 CDKL2Q92772 493 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SLAMF9Q96A28 289 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TMEM186Q96B77 213 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SGK3Q96BR1 496 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 Q96MF0 132 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 CFAP57Q96MR6 1250 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 NECTIN4Q96NY8 510 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 PARK7Q99497 189 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 PKP2Q99959 881 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 AIFM2Q9BRQ8 373 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SLC25A23Q9BV35 468 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 MLST8Q9BVC4 326 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 RMND5AQ9H871 391 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 FBXL17Q9UF56 701 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 MTRF1LQ9UGC7 380 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 GMEB2Q9UKD1 530 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 MKLN1Q9UL63 735 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 KIAA1257Q9ULG3 409 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 CA14Q9ULX7 337 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 CDC14AQ9UNH5 594 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 PPIEQ9UNP9 301 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 HPSEQ9Y251 543 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 MAST3O60307 1309 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 EVC2Q86UK5 1308 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ELOVL7A1L3X0 281 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 MAGEB16A2A368 324 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 WDR27A2RRH5 827 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GOLGA8OA6NCC3 632 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TRIM49BA6NDI0 452 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 OR6C65A6NJZ3 312 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 KDM4EB2RXH2 506 aaPredicted RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 GOLGA8NF8WBI6 632 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 F8WDY8 70 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CLIC2O15247 247 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 PPM1DO15297 605 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 MPPED1O15442 326 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ST8SIA3O43173 380 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 KRT86O43790 486 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 PEX1O43933 1283 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ACSL4O60488 711 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CCNT2O60583 730 aaKnown RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 DNAJB6O75190 326 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CHRNA1P02708 482 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SLPIP03973 132 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GBAP04062 536 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 UQCRFS1P1P0C7P4 283 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CCDC192P0DO97 292 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 HKR1P10072 659 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SRCP12931 536 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CPN2P22792 545 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ADORA2AP29274 412 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 UQCRC1P31930 480 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 RPL9P32969 192 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms