RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 ZNF648Q5T619 568 aaPredicted RBP17.05■□□□□ 0.32
RXRB-203ENST00000481441 C1QL3Q5VWW1 255 aa17.05■□□□□ 0.32
RXRB-203ENST00000481441 SLC6A19Q695T7 634 aa17.05■□□□□ 0.32
RXRB-203ENST00000481441 IRGCQ6NXR0 463 aa17.05■□□□□ 0.32
RXRB-203ENST00000481441 OR2AG1Q9H205 316 aa17.05■□□□□ 0.32
RXRB-203ENST00000481441 SLC40A1Q9NP59 571 aa17.05■□□□□ 0.32
RXRB-203ENST00000481441 ARFGAP3Q9NP61 516 aa17.05■□□□□ 0.32
RXRB-203ENST00000481441 SLAMF7Q9NQ25 335 aa17.05■□□□□ 0.32
RXRB-203ENST00000481441 IGHV5-51A0A0C4DH38 117 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 C1orf232A0A0U1RR37 186 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 RGSL1A5PLK6 1076 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 TMCO5BA8MYB1 307 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 POU3F2P20265 443 aaPredicted RBP17.04■□□□□ 0.32
RXRB-203ENST00000481441 LPOP22079 712 aaPredicted RBP17.04■□□□□ 0.32
RXRB-203ENST00000481441 RPL26P61254 145 aaKnown RBP17.04■□□□□ 0.32
RXRB-203ENST00000481441 PPP1CAP62136 330 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 GPR18Q14330 331 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 KCNAB1Q14722 419 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 SMTNL2Q2TAL5 461 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 CRTC3Q6UUV7 619 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 ABRAXAS1Q6UWZ7 409 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 ADGRG6Q86SQ4 1221 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 HPS6Q86YV9 775 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.04■□□□□ 0.32
RXRB-203ENST00000481441 RBMXL3Q8N7X1 1067 aaKnown RBP17.04■□□□□ 0.32
RXRB-203ENST00000481441 LPCAT1Q8NF37 534 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 ADAMTS17Q8TE56 1095 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 PNPLA2Q96AD5 504 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 MFRPQ9BY79 579 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 TRIM39Q9HCM9 518 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 DTLQ9NZJ0 730 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 PKD2L2Q9NZM6 624 aa17.04■□□□□ 0.32
RXRB-203ENST00000481441 RPL26L1Q9UNX3 145 aaKnown RBP17.04■□□□□ 0.32
RXRB-203ENST00000481441 FARSAQ9Y285 508 aaKnown RBP17.04■□□□□ 0.32
RXRB-203ENST00000481441 PDZK1P1A8MUH7 402 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 GPR89AB7ZAQ6 455 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 MTA2O94776 668 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 CBX6O95503 412 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 TPM2P07951 284 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 GPR89BP0CG08 455 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 TCF4P15884 667 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 ZNF7P17097 686 aaPredicted RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 CES1P23141 567 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 SERPINB6P35237 376 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 PCK1P35558 622 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 SEPT7Q16181 437 aaKnown RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 INSCQ1MX18 579 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 PLA2G4EQ3MJ16 856 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 TDRD12Q587J7 1177 aaKnown RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 PPP1R2P3Q6NXS1 205 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 ZNF517Q6ZMY9 492 aaPredicted RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 BPHLQ86WA6 291 aaPredicted RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 RHOT1Q8IXI2 618 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 RBM12BQ8IXT5 1001 aaKnown RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 SIDT2Q8NBJ9 832 aaKnown RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 FDCSPQ8NFU4 85 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 ARRDC2Q8TBH0 407 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 ENOX1Q8TC92 643 aaKnown RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 UBXN4Q92575 508 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 MAML1Q92585 1016 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 C19orf60Q96EN9 201 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
RXRB-203ENST00000481441 NUDT9Q9BW91 350 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 PCDH9Q9HC56 1237 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.03■□□□□ 0.32
RXRB-203ENST00000481441 MAP10Q9P2G4 905 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 C2CD3Q4AC94 2353 aa17.03■□□□□ 0.32
RXRB-203ENST00000481441 OR52A4PA6NMU1 304 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 KRT86O43790 486 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 FERP16591 822 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 ELAVL4P26378 380 aaKnown RBP17.02■□□□□ 0.32
RXRB-203ENST00000481441 STX1AQ16623 288 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 QPCTQ16769 361 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 BOLA3Q53S33 107 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 IRF2BP2Q7Z5L9 587 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 LRRC49Q8IUZ0 686 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 SRRM1Q8IYB3 904 aaKnown RBP17.02■□□□□ 0.32
RXRB-203ENST00000481441 HSPH1Q92598 858 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 EID2BQ96D98 161 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 TIMM29Q9BSF4 260 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 FGF21Q9NSA1 209 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 SRPK3Q9UPE1 567 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 SLC5A6Q9Y289 635 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 DNAJC16Q9Y2G8 782 aa17.02■□□□□ 0.32
RXRB-203ENST00000481441 POLEQ07864 2286 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 SSU72P8A0A1W2PR75 194 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 KMOO15229 486 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 SLC25A14O95258 325 aaPredicted RBP17.01■□□□□ 0.31
RXRB-203ENST00000481441 EBLN1P0CF75 366 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 RARAP10276 462 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 CA4P22748 312 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 IL4RP24394 825 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 RPL10P27635 214 aaKnown RBP17.01■□□□□ 0.31
RXRB-203ENST00000481441 PDE1BQ01064 536 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 ACY1Q03154 408 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 NIPAL4Q0D2K0 466 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 NR6A1Q15406 480 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 ZNF569Q5MCW4 686 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 AGAP9Q5VTM2 703 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms