RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TIMP2P16035 220 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 ADRA1BP35368 520 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SOX6P35712 828 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CCT3P49368 545 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CAPZA1P52907 286 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CDH8P55286 799 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 PUDPQ08623 228 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 STX5Q13190 355 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 GPR68Q15743 365 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 METTL24Q5JXM2 366 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TPRG1LQ5T0D9 272 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 FAM182AQ5T1J6 154 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 MBLAC2Q68D91 279 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SULT1C3Q6IMI6 304 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SLC27A4Q6P1M0 643 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 HHIPL2Q6UWX4 724 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 LUZP2Q86TE4 346 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 KRT73Q86Y46 540 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 ELP4Q96EB1 424 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CENPNQ96H22 339 aaPredicted RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TEPSINQ96N21 525 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 DPYSL5Q9BPU6 564 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 FAM118BQ9BPY3 351 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 NAT9Q9BTE0 207 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 QRSL1Q9H0R6 528 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 UPF3AQ9H1J1 476 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 GAREM1Q9H706 876 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CATSPERZQ9NTU4 200 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 MED9Q9NWA0 146 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 AJAP1Q9UKB5 411 aaPredicted RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TBC1D24Q9ULP9 559 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 PCDHB5Q9Y5E4 795 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 PCDHB3Q9Y5E6 796 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SYNJ2BP-COX16A0A087WUM0 186 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CCDC195A0A1B0GUA6 201 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TERTO14746 1132 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SSX4O60224 188 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 BRINP1O60477 761 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 LRCH4O75427 683 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 HTR1AP08908 422 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TCF4P15884 667 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CYP7A1P22680 504 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 MSX2P35548 267 aaPredicted RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SLC1A6P48664 564 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TKTL1P51854 596 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TRAF3Q13114 568 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 ART3Q13508 389 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 COTL1Q14019 142 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 GRB7Q14451 532 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 BAK1Q16611 211 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 KNOP1Q1ED39 458 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 DPY19L1Q2PZI1 675 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 COL28A1Q2UY09 1125 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 AP5B1Q2VPB7 878 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 PABPC1L2AQ5JQF8 200 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 EPGNQ6UW88 154 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 R3HCC1LQ7Z5L2 792 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 ZER1Q7Z7L7 766 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 PLD3Q8IV08 490 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SLC22A9Q8IVM8 553 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 C9orf62Q8N4C0 152 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CAMKK1Q8N5S9 505 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 GPR156Q8NFN8 814 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 ELMO1Q92556 727 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 USP13Q92995 863 aaPredicted RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 DCAF5Q96JK2 942 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 C10orf90Q96M02 699 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 OR2A14Q96R47 310 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 LXNQ9BS40 222 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 DGCR6LQ9BY27 220 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 DBNDD1Q9H9R9 158 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 CUEDC1Q9NWM3 386 aaPredicted RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 TAS2R14Q9NYV8 317 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 RGS17Q9UGC6 210 aaPredicted RBP10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 ZNRF3Q9ULT6 936 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 KCNH4Q9UQ05 1017 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 DMRT1Q9Y5R6 373 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 SESN1Q9Y6P5 492 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 AP1M2Q9Y6Q5 423 aa10.28□□□□□ -0.76
PRPF4B-206ENST00000481109 BCORQ6W2J9 1755 aa10.27□□□□□ -0.76
PRPF4B-206ENST00000481109 MPTX1A8MV57 137 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 K7ENM7 598 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 RTCAO00442 366 aaKnown RBP10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 PRDM1O75626 825 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 RFPL3O75679 317 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 FAM13AO94988 1023 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 LYPLA2O95372 231 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 GCNT3O95395 438 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 CLIC3O95833 236 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 IFNA7P01567 189 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 FBP1P09467 338 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 RNF224P0DH78 156 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 MAGP20916 626 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 PTAFRP25105 342 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 SSTR1P30872 391 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 RPS9P46781 194 aaKnown RBP10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 RAB25P57735 213 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 CHAF1BQ13112 559 aa10.27□□□□□ -0.77
PRPF4B-206ENST00000481109 FRG1Q14331 258 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms