RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, human

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-219	ENST00000480638	DMBX1	Q8NFW5	382 aa		4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	PHF21A	Q96BD5	680 aa		4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	LINGO1	Q96FE5	620 aa		4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	SEMA3C	Q99985	751 aa		4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	CHCHD6	Q9BRQ6	235 aa		4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	LRMDA	Q9H2I8	198 aa		4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	EIF2B3	Q9NR50	452 aa	Known RBP	4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	KLHL9	Q9P2J3	617 aa		4.96	□□□□□ -1.62
CALD1-219	ENST00000480638	GRID2	O43424	1007 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	HS6ST1	O60243	411 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	WDHD1	O75717	1129 aa	Predicted RBP	4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	GABRB1	P18505	474 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	AHR	P35869	848 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	MSH2	P43246	934 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	CDH8	P55286	799 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	RPL24	P83731	157 aa	Known RBP	4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	SPOCK1	Q08629	439 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	IK	Q13123	557 aa	Predicted RBP	4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	RAB6C	Q53S08	254 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	PDSS1	Q5T2R2	415 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	TMEM198	Q66K66	360 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	C19orf48	Q6RUI8	117 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	PLEKHM3	Q6ZWE6	761 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	CHST9	Q7L1S5	443 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	TEX11	Q8IYF3	940 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	PGAM5	Q96HS1	289 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	GAD1	Q99259	594 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	TRMT61B	Q9BVS5	477 aa	Known RBP	4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	RAB6C	Q9H0N0	254 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	TCP11L1	Q9NUJ3	509 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	POLG2	Q9UHN1	485 aa		4.95	□□□□□ -1.62
CALD1-219	ENST00000480638	DVL1	O14640	695 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	LINC01565	O15544	149 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	SH3BP5	O60239	455 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	GPC4	O75487	556 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	HRH2	P25021	359 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	HOXA13	P31271	388 aa	Predicted RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	HADHA	P40939	763 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	GARS	P41250	739 aa	Known RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	HOXA1	P49639	335 aa	Predicted RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	MMP14	P50281	582 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	TERF1	P54274	439 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	DVL1P1	P54792	670 aa	Predicted RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	PHEX	P78562	749 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	MVP	Q14764	893 aa	Known RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	ZNF628	Q5EBL2	1059 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	RARS2	Q5T160	578 aa	Known RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	MARK2	Q7KZI7	788 aa	Known RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	TTC39C	Q8N584	583 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	SLC5A8	Q8N695	610 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	GCSAM	Q8N6F7	178 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	PPP4R1	Q8TF05	950 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	ALG14	Q96F25	216 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	NUDCD1	Q96RS6	583 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	VPS33B	Q9H267	617 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	OGFR	Q9NZT2	677 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	FBXL17	Q9UF56	701 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	B3GALT5	Q9Y2C3	310 aa		4.94	□□□□□ -1.62
CALD1-219	ENST00000480638	GREB1L	Q9C091	1923 aa	Predicted RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	BUD23	O43709	281 aa	Known RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	SYNGR3	O43761	229 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	ZBED4	O75132	1171 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	WISP2	O76076	250 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	TPPP	O94811	219 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	IGHV4-39	P01824	125 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	RB1	P06400	928 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	SP1	P08047	785 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	CLTB	P09497	229 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	ZNF23	P17027	643 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	GM2A	P17900	193 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	PON1	P27169	355 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	ARCN1	P48444	511 aa	Known RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	CTSC	P53634	463 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	GAGE5	Q13069	117 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	GAGE6	Q13070	117 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	SIM2	Q14190	667 aa	Predicted RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	GSDMB	Q8TAX9	411 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	LRRC8C	Q8TDW0	803 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	GFI1	Q99684	422 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	SRSF8	Q9BRL6	282 aa	Known RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	DBNL	Q9UJU6	430 aa	Known RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	FAF1	Q9UNN5	650 aa	Predicted RBP	4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	CMAHP	Q9Y471	501 aa		4.93	□□□□□ -1.62
CALD1-219	ENST00000480638	PRAG1	Q86YV5	1406 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	TMEM8B	A6NDV4	472 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	C5orf60	A6NFR6	353 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	CDRT15L2	A8MXV6	281 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	ANKRD66	B4E2M5	251 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	AP3D1	O14617	1153 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	TMCC2	O75069	709 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	ZNF217	O75362	1048 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	SLC22A3	O75751	556 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	PLG	P00747	810 aa	Predicted RBP	4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	NR2F2	P24468	414 aa		4.92	□□□□□ -1.62
CALD1-219	ENST00000480638	C4orf50	Q6ZRC1	276 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms