RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TRIM39Q9HCM9 518 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 KLC4Q9NSK0 619 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 KLHL8Q9P2G9 620 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-218ENST00000479554 FAM153AQ9UHL3 310 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 PCDHGA4Q9Y5G9 962 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 SPO11Q9Y5K1 396 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 ZNF462Q96JM2 2506 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 PIEZO2Q9H5I5 2752 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 hCG_1818297A0A087WSY0 165 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 EFCAB7A8K855 629 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 A8MU76 341 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 B4E171 279 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 AURKAO14965 403 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 KMOO15229 486 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 ZRANB2O95218 330 aaKnown RBP eCLIP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 PLA2G2AP14555 144 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 NFKB1P19838 968 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 CD68P34810 354 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 TSPAN7P41732 249 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 ATP1A2P50993 1020 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 CLCNKAP51800 687 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 WNT3AP56704 352 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 WASHC5Q12768 1159 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 WDR74Q6RFH5 385 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 LRRTM4Q86VH4 590 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 ZC3H18Q86VM9 953 aaKnown RBP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 SLC35F6Q8N357 371 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 ZSCAN1Q8NBB4 408 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 JPH3Q8WXH2 748 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 NCSTNQ92542 709 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 HAUS1Q96CS2 278 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 MED8Q96G25 268 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 RBM41Q96IZ5 413 aaKnown RBP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 PLEKHG4BQ96PX9 1271 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 ASPSCR1Q9BZE9 553 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 BPIFA1Q9NP55 256 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 PRDM8Q9NQV8 689 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 OCIAD1Q9NX40 245 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 SLC39A1Q9NY26 324 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 PDP2Q9P2J9 529 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 CPNE7Q9UBL6 633 aa14.14□□□□□ -0.15
ATG4B-218ENST00000479554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.14□□□□□ -0.15
ATG4B-218ENST00000479554 CTAGE9A4FU28 777 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 PDZK1P1A8MUH7 402 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 F5H423 210 aaPredicted RBP14.13□□□□□ -0.15
ATG4B-218ENST00000479554 CHUKO15111 745 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 VEGFDO43915 354 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 MTX2O75431 263 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 MARCKSL1P49006 195 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 ARSDP51689 593 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 RAB15P59190 212 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 UBE2IP63279 158 aaKnown RBP14.13□□□□□ -0.15
ATG4B-218ENST00000479554 ADCY2Q08462 1091 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 NOMO1Q15155 1222 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 DCAF12Q5T6F0 453 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 C11orf63Q6NUN7 778 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 KDELC1Q6UW63 502 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 TRIM48Q8IWZ4 208 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 RCOR2Q8IZ40 523 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 MYRIPQ8NFW9 859 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 QKIQ96PU8 341 aaKnown RBP eCLIP14.13□□□□□ -0.15
ATG4B-218ENST00000479554 VPS35Q96QK1 796 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 VAT1Q99536 393 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 TIMM29Q9BSF4 260 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 TBC1D10AQ9BXI6 508 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 EPB41L1Q9H4G0 881 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 TRABDQ9H4I3 376 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 TRIM10Q9UDY6 481 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 TFR2Q9UP52 801 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 DNAJC16Q9Y2G8 782 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 B3GALT1Q9Y5Z6 326 aa14.13□□□□□ -0.15
ATG4B-218ENST00000479554 TENM4Q6N022 2769 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 SDK2Q58EX2 2172 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 LOC285095A0A1B0GVY8 99 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 LILRA5A6NI73 299 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 BTNL10A8MVZ5 291 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 HACD1B0YJ81 288 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 CDK14O94921 469 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 ITGB2P05107 769 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 ZNF7P17097 686 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-218ENST00000479554 HMGCLP35914 325 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 TUBB2AQ13885 445 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 GTF2H3Q13889 308 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 SEPT7Q16181 437 aaKnown RBP14.12□□□□□ -0.15
ATG4B-218ENST00000479554 ATP13A5Q4VNC0 1218 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 SIRPB2Q5JXA9 342 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 ANKS6Q68DC2 871 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 PID1Q7Z2X4 250 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 DAAM2Q86T65 1068 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 TRAPPC5Q8IUR0 188 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 ZNF567Q8N184 647 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 TTC30BQ8N4P2 665 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 SLC25A41Q8N5S1 370 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 IL22RA1Q8N6P7 574 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 BMPERQ8N8U9 685 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 IPMKQ8NFU5 416 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 TRIM58Q8NG06 486 aa14.12□□□□□ -0.15
ATG4B-218ENST00000479554 GDAP1Q8TB36 358 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms