RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 CCDC17Q96LX7 622 aa3□□□□□ -1.93
ATRX-205ENST00000479487 CCDC138Q96M89 665 aa3□□□□□ -1.93
ATRX-205ENST00000479487 PRICKLE1Q96MT3 831 aaPredicted RBP3□□□□□ -1.93
ATRX-205ENST00000479487 SH3GL1Q99961 368 aa3□□□□□ -1.93
ATRX-205ENST00000479487 CCDC77Q9BR77 488 aa3□□□□□ -1.93
ATRX-205ENST00000479487 HAUS8Q9BT25 410 aa3□□□□□ -1.93
ATRX-205ENST00000479487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3□□□□□ -1.93
ATRX-205ENST00000479487 MAK16Q9BXY0 300 aaKnown RBP3□□□□□ -1.93
ATRX-205ENST00000479487 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
ATRX-205ENST00000479487 OSBPL8Q9BZF1 889 aa3□□□□□ -1.93
ATRX-205ENST00000479487 TRIM31Q9BZY9 425 aa3□□□□□ -1.93
ATRX-205ENST00000479487 TRIM9Q9C026 710 aa3□□□□□ -1.93
ATRX-205ENST00000479487 PRSS22Q9GZN4 317 aa3□□□□□ -1.93
ATRX-205ENST00000479487 RBM38Q9H0Z9 239 aaKnown RBP3□□□□□ -1.93
ATRX-205ENST00000479487 NAPBQ9H115 298 aa3□□□□□ -1.93
ATRX-205ENST00000479487 GANQ9H2C0 597 aa3□□□□□ -1.93
ATRX-205ENST00000479487 CCDC68Q9H2F9 335 aa3□□□□□ -1.93
ATRX-205ENST00000479487 CDC42EP4Q9H3Q1 356 aaKnown RBP3□□□□□ -1.93
ATRX-205ENST00000479487 ZNF696Q9H7X3 374 aa3□□□□□ -1.93
ATRX-205ENST00000479487 AS3MTQ9HBK9 375 aa3□□□□□ -1.93
ATRX-205ENST00000479487 PLGRKTQ9HBL7 147 aa3□□□□□ -1.93
ATRX-205ENST00000479487 PALMDQ9NP74 551 aa3□□□□□ -1.93
ATRX-205ENST00000479487 KCNK9Q9NPC2 374 aa3□□□□□ -1.93
ATRX-205ENST00000479487 RIC8AQ9NPQ8 531 aa3□□□□□ -1.93
ATRX-205ENST00000479487 VPS45Q9NRW7 570 aa3□□□□□ -1.93
ATRX-205ENST00000479487 INIPQ9NRY2 104 aa3□□□□□ -1.93
ATRX-205ENST00000479487 EURLQ9NYK6 297 aa3□□□□□ -1.93
ATRX-205ENST00000479487 TBC1D7Q9P0N9 293 aa3□□□□□ -1.93
ATRX-205ENST00000479487 MTUS1Q9ULD2 1270 aa3□□□□□ -1.93
ATRX-205ENST00000479487 ASAP1Q9ULH1 1129 aa3□□□□□ -1.93
ATRX-205ENST00000479487 TRAF3IP3Q9Y228 551 aa3□□□□□ -1.93
ATRX-205ENST00000479487 CARD8Q9Y2G2 431 aa3□□□□□ -1.93
ATRX-205ENST00000479487 RABGAP1Q9Y3P9 1069 aa3□□□□□ -1.93
ATRX-205ENST00000479487 TTLL3Q9Y4R7 772 aa3□□□□□ -1.93
ATRX-205ENST00000479487 SQORQ9Y6N5 450 aa3□□□□□ -1.93
ATRX-205ENST00000479487 NHSQ6T4R5 1651 aa3□□□□□ -1.93
ATRX-205ENST00000479487 CICQ96RK0 1608 aaPredicted RBP3□□□□□ -1.93
ATRX-205ENST00000479487 CROCCQ5TZA2 2017 aa3□□□□□ -1.93
ATRX-205ENST00000479487 RGPD3A6NKT7 1758 aaPredicted RBP3□□□□□ -1.93
ATRX-205ENST00000479487 RGPD4Q7Z3J3 1758 aa3□□□□□ -1.93
ATRX-205ENST00000479487 ROBO3Q96MS0 1386 aa3□□□□□ -1.93
ATRX-205ENST00000479487 TANC1Q9C0D5 1861 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 FAM234BA2RU67 622 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 E5RJQ4 531 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 SMIM22K7EJ46 135 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 FBP2O00757 339 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 LSM1O15116 133 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 VILLO15195 856 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 BUD23O43709 281 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 SH3BP5O60239 455 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 PRAMEF2O60811 474 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 ZBED4O75132 1171 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 CNOT3O75175 753 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 TRMUO75648 421 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 IDH1O75874 414 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 NOL4O94818 638 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 NTSR2O95665 410 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 TTC4O95801 387 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 VIPP01282 170 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 IL1BP01584 269 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 UQCRFS1P1P0C7P4 283 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 GSTT2P0CG29 244 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 GSTT2BP0CG30 244 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 TMIGD3P0DMS9 266 aaPredicted RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 T-ENOLP0DO92 83 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 PCP11498 1178 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 KRT13P13646 458 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 PTPN2P17706 415 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 MMP8P22894 467 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 CTNNA2P26232 953 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 STIP1P31948 543 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 FOXN2P32314 431 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 PHBP35232 272 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 PGM1P36871 562 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 IGHMBP2P38935 993 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 CETN2P41208 172 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 SLCO1A2P46721 670 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 RPL21P46778 160 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 HSPA7P48741 367 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 NR1H2P55055 460 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 HADHBP55084 474 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 NUP107P57740 925 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 ACTR3P61158 418 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 POLR2FP61218 127 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 RPS3AP61247 264 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 CREB5Q02930 508 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 PPARDQ03181 441 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 CFHR1Q03591 330 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 RELAQ04206 551 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 TBL3Q12788 808 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 SF3A3Q12874 501 aaKnown RBP eCLIP2.99□□□□□ -1.93
ATRX-205ENST00000479487 PPP2R5CQ13362 524 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 ITGA7Q13683 1181 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 THOC5Q13769 683 aaKnown RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 APOFQ13790 326 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 PDK3Q15120 406 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 RASA2Q15283 850 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 USP41Q3LFD5 358 aa2.99□□□□□ -1.93
ATRX-205ENST00000479487 TAF1BQ53T94 588 aaPredicted RBP2.99□□□□□ -1.93
ATRX-205ENST00000479487 EARS2Q5JPH6 523 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms