RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 KELP23276 732 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 SSR2P43308 183 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 MAPK10P53779 464 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 CLDN10P78369 228 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 RIPK1Q13546 671 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 PDK3Q15120 406 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 FAM72AQ5TYM5 149 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 FAM72DQ6L9T8 149 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 ZC3HC1Q86WB0 502 aaKnown RBP14.09□□□□□ -0.15
NPHP4-208ENST00000478423 FAM72BQ86X60 149 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.09□□□□□ -0.155e-8■■■■■ 204.6
NPHP4-208ENST00000478423 PPCDCQ96CD2 204 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 DDX18Q9NVP1 670 aaKnown RBP14.09□□□□□ -0.15
NPHP4-208ENST00000478423 PIP5K1BO14986 540 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 TRBC1P01850 177 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 PROZP22891 400 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 TRIM32Q13049 653 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 CHIT1Q13231 466 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 RALGPS2Q86X27 583 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-208ENST00000478423 IGDCC3Q8IVU1 814 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 PGAM4Q8N0Y7 254 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 TMEM130Q8N3G9 435 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF655Q8N720 491 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-208ENST00000478423 LPGAT1Q92604 370 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF395Q9H8N7 513 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-208ENST00000478423 MYO7AQ13402 2215 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 H0YGN5 161 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 NPHS1O60500 1241 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 TIPRLO75663 272 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 ALPIP09923 528 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 ATP6V1C1P21283 382 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 CHN2P52757 468 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 GTF2H2Q13888 395 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 DGCR6Q14129 220 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 CPTPQ5TA50 214 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 GTF2H2CQ6P1K8 395 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 TRIM40Q6P9F5 258 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 RNF19BQ6ZMZ0 732 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 RINLQ6ZS11 566 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 WDR48Q8TAF3 677 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 DGCR6LQ9BY27 220 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 COPG1Q9Y678 874 aaKnown RBP14.09□□□□□ -0.15
NPHP4-208ENST00000478423 NFS1Q9Y697 457 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 LINC00854A0A1B0GVQ3 168 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 SIX3O95343 332 aaPredicted RBP14.08□□□□□ -0.15
NPHP4-208ENST00000478423 KRT75O95678 551 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 MAGEA11P43364 429 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 CHSY3Q70JA7 882 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 C14orf80Q86SX3 495 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 OFCC1Q8IZS5 231 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 CYP4Z2PQ8N1L4 340 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 DTNBP1Q96EV8 351 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF317Q96PQ6 595 aaPredicted RBP14.08□□□□□ -0.15
NPHP4-208ENST00000478423 GPR62Q9BZJ7 368 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 SUV39H2Q9H5I1 410 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 SOHLH2Q9NX45 425 aa14.08□□□□□ -0.15
NPHP4-208ENST00000478423 SAMHD1Q9Y3Z3 626 aaKnown RBP14.08□□□□□ -0.15
NPHP4-208ENST00000478423 DYTNA2CJ06 578 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 PTGESO14684 152 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 NDUFS2O75306 463 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 BCL10O95999 233 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 CCR4P51679 360 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 MRPS15P82914 257 aaKnown RBP14.08□□□□□ -0.16
NPHP4-208ENST00000478423 SF1Q15637 639 aaKnown RBP14.08□□□□□ -0.16
NPHP4-208ENST00000478423 TRIM16LQ309B1 348 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 LPCAT4Q643R3 524 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 TMEM198Q66K66 360 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 BHLHB9Q6PI77 547 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 SVOPQ8N4V2 548 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 FLCNQ8NFG4 579 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 C10orf82Q8WW14 230 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 CADM1Q9BY67 442 aaKnown RBP14.08□□□□□ -0.16
NPHP4-208ENST00000478423 MFSD1Q9H3U5 465 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 ZNF232Q9UNY5 417 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 AQP1P29972 269 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 ADSLP30566 484 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-208ENST00000478423 SERPINB1P30740 379 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 GJA5P36382 358 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 TMEM220Q6QAJ8 160 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 NAPRTQ6XQN6 538 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 LYSMD3Q7Z3D4 306 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 ZNF605Q86T29 641 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 OR10T2Q8NGX3 314 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 USP29Q9HBJ7 922 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 VPS4AQ9UN37 437 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 AP4B1Q9Y6B7 739 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 U3KQV3 271 aa14.08□□□□□ -0.16
NPHP4-208ENST00000478423 TRBV23OR9-2A0A075B6M9 112 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ANKRD66B4E2M5 251 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PER2O15055 1255 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PRKCHP24723 683 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ALFQ53S48 1182 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CAND1Q86VP6 1230 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 BPIFB6Q8NFQ5 453 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 RNF186Q9NXI6 227 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 GTF2A1LQ9UNN4 478 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ANGPT4Q9Y264 503 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PSAT1Q9Y617 370 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 NUDT14O95848 222 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms