RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 C11orf96Q7Z7L8 435 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 VSIG1Q86XK7 387 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 SPATA22Q8NHS9 363 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 SLC35G2Q8TBE7 412 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 KIAA1143Q96AT1 154 aaPredicted RBP16.45■□□□□ 0.22
TRIM13-208ENST00000478111 EFHD1Q9BUP0 239 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 EPN3Q9H201 632 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 OSGEPL1Q9H4B0 414 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 RAD18Q9NS91 495 aa16.45■□□□□ 0.22
TRIM13-208ENST00000478111 KMOO15229 486 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 MTX2O75431 263 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 MTA2O94776 668 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 MT-CYBP00156 380 aaPredicted RBP16.44■□□□□ 0.22
TRIM13-208ENST00000478111 VIPP01282 170 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 LEPRP48357 1165 aaKnown RBP16.44■□□□□ 0.22
TRIM13-208ENST00000478111 SH3BP2P78314 561 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 PDK1Q15118 436 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 INSCQ1MX18 579 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 CRTC2Q53ET0 693 aaPredicted RBP16.44■□□□□ 0.22
TRIM13-208ENST00000478111 COLEC12Q5KU26 742 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 ATP1A1-AS1Q5TC04 95 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 LRRTM4Q86VH4 590 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 STARD8Q92502 1023 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 RNF31Q96EP0 1072 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 DNAJC7Q99615 494 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 TIMM29Q9BSF4 260 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 GPR63Q9BZJ6 419 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 XPO4Q9C0E2 1151 aaKnown RBP16.44■□□□□ 0.22
TRIM13-208ENST00000478111 GLOD4Q9HC38 313 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 ZNF71Q9NQZ8 489 aaPredicted RBP16.44■□□□□ 0.22
TRIM13-208ENST00000478111 DNAJC16Q9Y2G8 782 aa16.44■□□□□ 0.22
TRIM13-208ENST00000478111 MRPS18BQ9Y676 258 aaKnown RBP16.44■□□□□ 0.22
TRIM13-208ENST00000478111 NBPF19A0A087WUL8 3843 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 RP1L1Q8IWN7 2480 aaPredicted RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 APOL1O14791 398 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 TOX3O15405 576 aaPredicted RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 KIF1CO43896 1103 aaKnown RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 VEGFDO43915 354 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 CDK14O94921 469 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 NDST3O95803 873 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 SLC4A1P02730 911 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 RPL10P27635 214 aaKnown RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 NOP2P46087 812 aaKnown RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 SEPHS1P49903 392 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 FOXM1Q08050 763 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 SEPT7Q16181 437 aaKnown RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 DEFB109BQ30KR1 87 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 ATP13A5Q4VNC0 1218 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 TEX44Q53QW1 395 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 AGAP9Q5VTM2 703 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 WASH2PQ6VEQ5 465 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 ESX1Q8N693 406 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 RSC1A1Q92681 617 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 ABHD17AQ96GS6 310 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 TGM7Q96PF1 710 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 VPS35Q96QK1 796 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 ZNF768Q9H5H4 540 aaKnown RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 SLC40A1Q9NP59 571 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 WASH6PQ9NQA3 447 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 RPS6KL1Q9Y6S9 549 aa16.43■□□□□ 0.22
TRIM13-208ENST00000478111 SPTAN1Q13813 2472 aaKnown RBP16.43■□□□□ 0.22
TRIM13-208ENST00000478111 SSU72P8A0A1W2PR75 194 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 OR52A4PA6NMU1 304 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 PDZK1P1A8MUH7 402 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 GOLGA6L19H0YKK7 550 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 TCN2P20062 427 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 PTPN3P26045 913 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 CD68P34810 354 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-208ENST00000478111 ARHGAP25P42331 645 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 SRSF1Q07955 248 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIM13-208ENST00000478111 GPR18Q14330 331 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 LRRC38Q5VT99 294 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 OR8K1Q8NGG5 319 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 C9orf43Q8TAL5 461 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-208ENST00000478111 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-208ENST00000478111 APOBEC4Q8WW27 367 aaKnown RBP16.42■□□□□ 0.22
TRIM13-208ENST00000478111 KLHL6Q8WZ60 621 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 RNF25Q96BH1 459 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-208ENST00000478111 TEKT5Q96M29 485 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 OR6C1Q96RD1 312 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 CHP1Q99653 195 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 MAK16Q9BXY0 300 aaKnown RBP16.42■□□□□ 0.22
TRIM13-208ENST00000478111 ULBP3Q9BZM4 244 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 BPIFA1Q9NP55 256 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 POT1Q9NUX5 634 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 ANAPC2Q9UJX6 822 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 WDR37Q9Y2I8 494 aa16.42■□□□□ 0.22
TRIM13-208ENST00000478111 LOC285095A0A1B0GVY8 99 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 PPP1R12AO14974 1030 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-208ENST00000478111 PMPCBO75439 489 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 FURINP09958 794 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 ZFXP17010 805 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-208ENST00000478111 AMD1P17707 334 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 IDSP22304 550 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 CA5AP35218 305 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 HMGCLP35914 325 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 CASRP41180 1078 aa16.41■□□□□ 0.22
TRIM13-208ENST00000478111 CAPZBP47756 277 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms