RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RAPSNQ13702 412 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 GTF2H3Q13889 308 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 ELOAQ14241 798 aaKnown RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR18Q14330 331 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 INPP5JQ15735 1006 aaPredicted RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 CHRNA6Q15825 494 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 PCSK7Q16549 785 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 DPYSL2Q16555 572 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 KYNUQ16719 465 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 BOLA3Q53S33 107 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 DNTTIP2Q5QJE6 756 aaKnown RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 HENMT1Q5T8I9 393 aaKnown RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 TXNRD3NBQ6F5E7 133 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 TIGD7Q6NT04 549 aaPredicted RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 PWWP2BQ6NUJ5 590 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 LRRTM4Q86VH4 590 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 TRAPPC5Q8IUR0 188 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 TMEM126BQ8IUX1 230 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 APLFQ8IW19 511 aaPredicted RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 CCNYQ8ND76 341 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 THAP4Q8WY91 577 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 SEC14L1Q92503 715 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 TRIM11Q96F44 468 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 BTBD6Q96KE9 485 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 TTC25Q96NG3 672 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 ADGRE3Q9BY15 652 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR63Q9BZJ6 419 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 BRD8Q9H0E9 1235 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 ING2Q9H160 280 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 HAUS4Q9H6D7 363 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 PCDH18Q9HCL0 1135 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 SOHLH2Q9NX45 425 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF624Q9P2J8 865 aaPredicted RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 CNOT6Q9ULM6 557 aaKnown RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 SHOC2Q9UQ13 582 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 PPIL1Q9Y3C6 166 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 NUP210LQ5VU65 1888 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 HIVEP3Q5T1R4 2406 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 UBA6A0AVT1 1052 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 TCP11X1B4DZS4 312 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 F5H423 210 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF185O15231 689 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 MATN3O15232 486 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 TOX3O15405 576 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 DDX3YO15523 660 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 FZD6O60353 706 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 DPM1O60762 260 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SCRG1O75711 98 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 FGF5P12034 268 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 FOLR1P15328 257 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 NELFEP18615 380 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 XRCC1P18887 633 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 PBLDP30039 288 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 PCK1P35558 622 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SLC19A1P41440 591 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 PTGIRP43119 386 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 MYL5Q02045 173 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 KLHL30Q0D2K2 578 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 IL10RAQ13651 578 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 NR6A1Q15406 480 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR19Q15760 415 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 IFI16Q16666 785 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 QPCTQ16769 361 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 UGT8Q16880 541 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 CT47A1Q5JQC4 288 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ARMC6Q6NXE6 501 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 JMJD6Q6NYC1 403 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SASS6Q6UVJ0 657 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 MAMDC2Q7Z304 686 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 PRSS42Q7Z5A4 293 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 IRF2BP2Q7Z5L9 587 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ADGRG6Q86SQ4 1221 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SYVN1Q86TM6 617 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 NLRP8Q86W28 1048 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SRRM1Q8IYB3 904 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 AOPEPQ8N6M6 819 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 GLYATL1Q969I3 302 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 CLIP3Q96DZ5 547 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ERGIC2Q96RQ1 377 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 WDR24Q96S15 920 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ZSCAN5AQ9BUG6 496 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 CEP41Q9BYV8 373 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SLC7A5P2Q9GIP4 190 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 AKIRIN1Q9H9L7 192 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 UCK1Q9HA47 277 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ZFYVE1Q9HBF4 777 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 TRIM39Q9HCM9 518 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 FGF21Q9NSA1 209 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 POT1Q9NUX5 634 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 CUEDC1Q9NWM3 386 aaPredicted RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 DTLQ9NZJ0 730 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 FAM8A1Q9UBU6 413 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SLC23A2Q9UGH3 650 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 LIMA1Q9UHB6 759 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ANAPC7Q9UJX3 599 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 SNX7Q9UNH6 387 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 PSMD13Q9UNM6 376 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF451Q9Y4E5 1061 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 MAP4K5Q9Y4K4 846 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms