RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RCAN2Q14206 197 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 DPY19L1Q2PZI1 675 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 MFSD4BQ5TF39 518 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 CXCL17Q6UXB2 119 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 BEND5Q7L4P6 421 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 GALNT7Q86SF2 657 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 P2RY8Q86VZ1 359 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 GALNT13Q8IUC8 556 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 DEFB106AQ8N104 65 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 ZNF296Q8WUU4 475 aaPredicted RBP15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 ATL1Q8WXF7 558 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 RORBQ92753 470 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 GLMNQ92990 594 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 YIPF6Q96EC8 236 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 TBL1YQ9BQ87 522 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 ASPSCR1Q9BZE9 553 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 DSN1Q9H410 356 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 NEK6Q9HC98 313 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 CHST12Q9NRB3 414 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 KLQ9UEF7 1012 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 FBXO5Q9UKT4 447 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 PCDHGA8Q9Y5G5 932 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 SCN1AP35498 2009 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 THSD7BQ9C0I4 1608 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 ATP6AP2A0A1C7CYW4 349 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 UBFD1O14562 309 aaKnown RBP15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 TREHO43280 583 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 ATP6AP2O75787 350 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 BMPR1AP36894 532 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 CASP3P42574 277 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 PGGT1BP53609 377 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 TPI1P60174 286 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 HERVK_113P63132 956 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 MVKQ03426 396 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 RFX4Q33E94 735 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 SLC10A6Q3KNW5 377 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 KANK2Q63ZY3 851 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 ZNF470Q6ECI4 717 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 STK32CQ86UX6 486 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 LYSMD2Q8IV50 215 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 SPATA6LQ8N4H0 392 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 TWIST2Q8WVJ9 160 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 FAR1Q8WVX9 515 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 DNAJB3Q8WWF6 145 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 ERLEC1Q96DZ1 483 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 C3orf30Q96M34 536 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 TSGA13Q96PP4 275 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 NPY6RQ99463 290 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 RBM4BQ9BQ04 359 aaKnown RBP15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 MRPL45Q9BRJ2 306 aaKnown RBP15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 RBM4Q9BWF3 364 aaKnown RBP15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 ERVK-6Q9BXR3 956 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 LRRC3Q9BY71 257 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 TP63Q9H3D4 680 aaPredicted RBP15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 CARD8Q9Y2G2 431 aa15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
CLSTN1-205ENST00000477264 EVPLLA8MZ36 301 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 TOR1BO14657 336 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 ADAMTS4O75173 837 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 XYLBO75191 536 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 ANXA9O76027 345 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 INMTO95050 263 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 HRH2P25021 359 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 RYKP34925 604 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 NKX3-2P78367 333 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 CHRNB3Q05901 458 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 SEMA3BQ13214 749 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 IMPG1Q17R60 797 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 OTUD1Q5VV17 481 aaPredicted RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 PCSK9Q8NBP7 692 aaKnown RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 SMG8Q8ND04 991 aaKnown RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 OR7G1Q8NGA0 311 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 ZNF300Q96RE9 604 aaPredicted RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 SEPHS2Q99611 448 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 NOL6Q9H6R4 1146 aaKnown RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 COMMD8Q9NX08 183 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 SYCE1LA8MT33 242 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 AZIN1O14977 448 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 SCO2O43819 266 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 IDH3BO43837 385 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 NCK1P16333 377 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 HOXB6P17509 224 aaKnown RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 ACVR2AP27037 513 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 ARNTP27540 789 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 PRMT2P55345 433 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 EMX2Q04743 252 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 CD47Q08722 323 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 MAPK11Q15759 364 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 GEN1Q17RS7 908 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 ADPRMQ3LIE5 342 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 EFL1Q7Z2Z2 1120 aaKnown RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 RAB44Q7Z6P3 723 aaPredicted RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 IFNEQ86WN2 208 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 CDR2LQ86X02 465 aaPredicted RBP15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 KIAA1958Q8N8K9 716 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 NETO2Q8NC67 525 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 NDNFQ8TB73 568 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 FBLIM1Q8WUP2 373 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 RASSF5Q8WWW0 418 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 SNX18Q96RF0 628 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms