RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CRY1Q16526 586 aa28.51■■■□□ 2.16
VEGFA-211ENST00000476772 KHDC1Q4VXA5 237 aaKnown RBP28.51■■■□□ 2.16
VEGFA-211ENST00000476772 TECRLQ5HYJ1 363 aa28.51■■■□□ 2.16
VEGFA-211ENST00000476772 UGT3A1Q6NUS8 523 aa28.51■■■□□ 2.16
VEGFA-211ENST00000476772 KLC3Q6P597 504 aa28.51■■■□□ 2.16
VEGFA-211ENST00000476772 PLRG1O43660 514 aaKnown RBP28.51■■■□□ 2.15
VEGFA-211ENST00000476772 TM7SF2O76062 418 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 C7P10643 843 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 CD1DP15813 335 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 NDUFV2P19404 249 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 DRD4P21917 467 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 SKIV2L2P42285 1042 aaKnown RBP28.51■■■□□ 2.15
VEGFA-211ENST00000476772 DPTQ07507 201 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 ZNF648Q5T619 568 aaPredicted RBP28.51■■■□□ 2.15
VEGFA-211ENST00000476772 SEL1L3Q68CR1 1132 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 RAET1GQ6H3X3 334 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 KIAA1324Q6UXG2 1013 aaKnown RBP28.51■■■□□ 2.15
VEGFA-211ENST00000476772 C10orf107Q8IVU9 208 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 OR14C36Q8NHC7 312 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 DCUN1D1Q96GG9 259 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 MRPL46Q9H2W6 279 aaKnown RBP28.51■■■□□ 2.15
VEGFA-211ENST00000476772 MBD1Q9UIS9 605 aaPredicted RBP28.51■■■□□ 2.15
VEGFA-211ENST00000476772 DHRS7Q9Y394 339 aa28.51■■■□□ 2.15
VEGFA-211ENST00000476772 TARM1B6A8C7 271 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 INPP4BO15327 924 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 SLC25A14O95258 325 aaPredicted RBP28.5■■■□□ 2.15
VEGFA-211ENST00000476772 TRIM16O95361 564 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 ACAP2Q15057 778 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 CHI3L2Q15782 390 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 DET1Q7L5Y6 550 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 FLCNQ8NFG4 579 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 BCAS4Q8TDM0 211 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 CCT8L2Q96SF2 557 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 MRPL57Q9BQC6 102 aaKnown RBP28.5■■■□□ 2.15
VEGFA-211ENST00000476772 WNT16Q9UBV4 365 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 MID2Q9UJV3 735 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 FBXL21Q9UKT6 434 aa28.5■■■□□ 2.15
VEGFA-211ENST00000476772 ZFR2Q9UPR6 939 aaKnown RBP28.5■■■□□ 2.15
VEGFA-211ENST00000476772 PIKFYVEQ9Y2I7 2098 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 ZBTB14O43829 449 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 ATP1B2P14415 290 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-211ENST00000476772 TFEBP19484 476 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 MSH3P20585 1137 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 GPR1P46091 355 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 ADPRHP54922 357 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 LDLRAP1Q5SW96 308 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 FAM47EQ6ZV65 393 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 CPNE9Q8IYJ1 553 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 RDH11Q8TC12 318 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 LMAN1LQ9HAT1 526 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 SLCO1B3Q9NPD5 702 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 FGFR1OP2Q9NVK5 253 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 THEGQ9P2T0 379 aa28.49■■■□□ 2.15
VEGFA-211ENST00000476772 CNOT6Q9ULM6 557 aaKnown RBP28.49■■■□□ 2.15
VEGFA-211ENST00000476772 CFAP99D6REC4 459 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 FAM107AO95990 144 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 MYL2P10916 166 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 ACADMP11310 421 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 GABRG2P18507 467 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 ZYG11AQ6WRX3 759 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 NLRP8Q86W28 1048 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 PHYKPLQ8IUZ5 450 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 TRIM42Q8IWZ5 723 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 NKAPQ8N5F7 415 aaKnown RBP28.48■■■□□ 2.15
VEGFA-211ENST00000476772 PTERQ96BW5 349 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 DERL2Q9GZP9 239 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 CD93Q9NPY3 652 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 FZD4Q9ULV1 537 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 TRPM6Q9BX84 2022 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 PRR23AA6NEV1 266 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 C19orf67A6NJJ6 358 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 OR56A5P0C7T3 313 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 RALBP11234 206 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 CES4AQ5XG92 561 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 ZCCHC23Q6ZST2 131 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 USP30Q70CQ3 517 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 ISCA2Q86U28 154 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 SGF29Q96ES7 293 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 OSBPL6Q9BZF3 934 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 ALG9Q9H6U8 611 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 LTB4R2Q9NPC1 389 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 NCKAP1Q9Y2A7 1128 aa28.48■■■□□ 2.15
VEGFA-211ENST00000476772 MRPS17Q9Y2R5 130 aaKnown RBP28.48■■■□□ 2.15
VEGFA-211ENST00000476772 TSPAN12O95859 305 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 RBP1P09455 135 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 FGF3P11487 239 aaPredicted RBP28.47■■■□□ 2.15
VEGFA-211ENST00000476772 STARD6P59095 220 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 LRRC32Q14392 662 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 UBXN2BQ14CS0 331 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 CPLX4Q7Z7G2 160 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 FAM124AQ86V42 546 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 KBTBD6Q86V97 674 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 EEF1AKMT1Q8WVE0 214 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 INPP5DQ92835 1189 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 LINGO1Q96FE5 620 aa28.47■■■□□ 2.15
VEGFA-211ENST00000476772 KLF11O14901 512 aa28.46■■■□□ 2.15
VEGFA-211ENST00000476772 IL2P60568 153 aa28.46■■■□□ 2.15
VEGFA-211ENST00000476772 SYNPOQ8N3V7 929 aa28.46■■■□□ 2.15
VEGFA-211ENST00000476772 PLA2G15Q8NCC3 412 aa28.46■■■□□ 2.15
VEGFA-211ENST00000476772 RAB3IL1Q8TBN0 382 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms