RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 COLEC12Q5KU26 742 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ZNF569Q5MCW4 686 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ZNF648Q5T619 568 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ALS2CLQ60I27 953 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 PDPK2PQ6A1A2 396 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 TMEM26Q6ZUK4 368 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 KDELC2Q7Z4H8 507 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ADGRG6Q86SQ4 1221 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 PLXDC1Q8IUK5 500 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 UNC5BQ8IZJ1 945 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ESX1Q8N693 406 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 CCNYQ8ND76 341 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 C9orf43Q8TAL5 461 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-208ENST00000475795 CPLX3Q8WVH0 158 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 STARD8Q92502 1023 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 IQCDQ96DY2 449 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 C9orf72Q96LT7 481 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ZNF830Q96NB3 372 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-208ENST00000475795 PLEKHG4BQ96PX9 1271 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ZSCAN5AQ9BUG6 496 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 SPATA16Q9BXB7 569 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 OR2AG1Q9H205 316 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 OSGEPL1Q9H4B0 414 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ZFYVE1Q9HBF4 777 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 TRIM39Q9HCM9 518 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ARFGAP3Q9NP61 516 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 KLC4Q9NSK0 619 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 OGFRQ9NZT2 677 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 SCHIP1Q9P0W5 487 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-208ENST00000475795 CTTNBP2NLQ9P2B4 639 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 UVRAGQ9P2Y5 699 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 NFKBIL1Q9UBC1 381 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-208ENST00000475795 LCMT1Q9UIC8 334 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 ANAPC2Q9UJX6 822 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 CAPN11Q9UMQ6 739 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 RELNP78509 3460 aa7.1□□□□□ -1.27
UBE4B-208ENST00000475795 SPENQ96T58 3664 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 LRRK2Q5S007 2527 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 PRR19A6NJB7 356 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 ZNF487B1APH4 448 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 KMOO15229 486 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TOX3O15405 576 aaPredicted RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 UBXN7O94888 489 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 SLC25A14O95258 325 aaPredicted RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 VIPP01282 170 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 GYPCP04921 128 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 H2AFZP0C0S5 128 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TCN2P20062 427 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 KDELR1P24390 212 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 NOP2P46087 812 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 UBASH3AP57075 661 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TPM4P67936 248 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 SRSF1Q07955 248 aaKnown RBP eCLIP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 INSCQ1MX18 579 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 DEFB109BQ30KR1 87 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 PLA2G4EQ3MJ16 856 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 ZFYVE27Q5T4F4 411 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 SLC9A4Q6AI14 798 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 CAVIN1Q6NZI2 390 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 CRTC3Q6UUV7 619 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 H2AFVQ71UI9 128 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TMC3Q7Z5M5 1100 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 LRRTM4Q86VH4 590 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 VSIG1Q86XK7 387 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TRIM48Q8IWZ4 208 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TRAM1L1Q8N609 369 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 PLD5Q8N7P1 536 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 CNTD1Q8N815 330 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 GPR26Q8NDV2 337 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 APOBEC4Q8WW27 367 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 RAPGEF5Q92565 580 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 GLYATL1Q969I3 302 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 IMP4Q96G21 291 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 RNF157Q96PX1 679 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TRIB3Q96RU7 358 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 TIMM29Q9BSF4 260 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 ULBP3Q9BZM4 244 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 ZNF768Q9H5H4 540 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 CBX8Q9HC52 389 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 MAGEE1Q9HCI5 957 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 ZNF71Q9NQZ8 489 aaPredicted RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 RAD18Q9NS91 495 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 SLC23A2Q9UGH3 650 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 SHOC2Q9UQ13 582 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 LUC7L2Q9Y383 392 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 ZNF711Q9Y462 761 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 MRPS18BQ9Y676 258 aaKnown RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 SLC30A1Q9Y6M5 507 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 RPS6KL1Q9Y6S9 549 aa7.09□□□□□ -1.27
UBE4B-208ENST00000475795 RP1L1Q8IWN7 2480 aaPredicted RBP7.09□□□□□ -1.27
UBE4B-208ENST00000475795 SPTBN1Q01082 2364 aaKnown RBP7.09□□□□□ -1.28
UBE4B-208ENST00000475795 PIKFYVEQ9Y2I7 2098 aa7.08□□□□□ -1.28
UBE4B-208ENST00000475795 ICE1Q9Y2F5 2266 aa7.08□□□□□ -1.28
UBE4B-208ENST00000475795 FLNCQ14315 2725 aa7.08□□□□□ -1.28
UBE4B-208ENST00000475795 NBPF19A0A087WUL8 3843 aa7.08□□□□□ -1.28
UBE4B-208ENST00000475795 COL12A1Q99715 3063 aa7.08□□□□□ -1.28
UBE4B-208ENST00000475795 LRRD1A4D1F6 860 aa7.08□□□□□ -1.28
UBE4B-208ENST00000475795 C3orf70A6NLC5 250 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-208ENST00000475795 PDZK1P1A8MUH7 402 aa7.08□□□□□ -1.28
UBE4B-208ENST00000475795 SLC4A1P02730 911 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms