RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ZNF829Q3KNS6 432 aaPredicted RBP4.85□□□□□ -1.63
NPHP3-206ENST00000474871 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.85□□□□□ -1.63
NPHP3-206ENST00000474871 CYB5R4Q7L1T6 521 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 TIGD4Q8IY51 512 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 GSPT2Q8IYD1 628 aaKnown RBP4.85□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF654Q8IZM8 581 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 ABRAQ8N0Z2 381 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 CADM2Q8N3J6 435 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 NECAB1Q8N987 351 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 EDAQ92838 391 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 MTBPQ96DY7 904 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 SERPINB12Q96P63 405 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 TOLLIPQ9H0E2 274 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 PCED1AQ9H1Q7 454 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 OR51M1Q9H341 326 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 SNX15Q9NRS6 342 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 TMEM39AQ9NV64 488 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 WBP1LQ9NX94 342 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 SMPD3Q9NY59 655 aaPredicted RBP4.85□□□□□ -1.63
NPHP3-206ENST00000474871 MARK1Q9P0L2 795 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 CDC23Q9UJX2 597 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 STARD10Q9Y365 291 aa4.85□□□□□ -1.63
NPHP3-206ENST00000474871 MEIS2O14770 477 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 BUB1O43683 1085 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 EFCAB14O75071 495 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 LAP3P28838 519 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 GJA4P35212 333 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CAPZA1P52907 286 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 AP1S1P61966 158 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 SP2Q02086 613 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 TEKQ02763 1124 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 MFSD14BQ5SR56 506 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CIAPIN1Q6FI81 312 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 KIAA0408Q6ZU52 694 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ARMCX2Q7L311 632 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF572Q7Z3I7 529 aaPredicted RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 OR4C15Q8NGM1 316 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 PCDH19Q8TAB3 1148 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 PRPF31Q8WWY3 499 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CAVIN3Q969G5 261 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 KIAA1191Q96A73 305 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CPPED1Q9BRF8 314 aaPredicted RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 TMEM120AQ9BXJ8 343 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 MTMR4Q9NYA4 1195 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CLEC2DQ9UHP7 191 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ADGRG1Q9Y653 693 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 LTBP1Q14766 1721 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 A0A1W2PPL8 197 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 MEIS1O00470 390 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 KIAA0355O15063 1070 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 HRO43593 1189 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 AVILO75366 819 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 SORBS2O94875 1100 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CSTAP01040 98 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 RNH1P13489 461 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CYP11B1P15538 503 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 PTPN6P29350 595 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 MLLT10P55197 1068 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 IL24Q13007 206 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CAPRIN1Q14444 709 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 PCGF3Q3KNV8 242 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ANO6Q4KMQ2 910 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 NKAIN1Q4KMZ8 207 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 EARS2Q5JPH6 523 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ZDHHC20Q5W0Z9 365 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CGB2Q6NT52 195 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 CYP4F22Q6NT55 531 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 PADI6Q6TGC4 694 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 C11orf57Q6ZUT1 292 aaPredicted RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ZBTB8OSQ8IWT0 167 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ASCC1Q8N9N2 400 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 KDM1BQ8NB78 822 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 NINJ1Q92982 152 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 TOP1MTQ969P6 601 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 NSUN4Q96CB9 384 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 SHARPINQ9H0F6 387 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 RIBC2Q9H4K1 309 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 EVA1AQ9H8M9 152 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 MRPL44Q9H9J2 332 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 MLXIPQ9HAP2 919 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 MAGEE1Q9HCI5 957 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 PISDQ9UG56 409 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 LAMB1P07942 1786 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 IRS2Q9Y4H2 1338 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 LOC100506127A0A0U1RQW1 187 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 HMX2A2RU54 273 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 WTIPA6NIX2 430 aaPredicted RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 C12orf71A8MTZ7 269 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 KDM4EB2RXH2 506 aaPredicted RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 NEDD8-MDP1E9PL57 170 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 UBOX5O94941 541 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 IL1AP01583 271 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF8P17098 575 aaPredicted RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 COL9A1P20849 921 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 HNRNPH3P31942 346 aaKnown RBP4.84□□□□□ -1.63
NPHP3-206ENST00000474871 NDUFV1P49821 464 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 NFIXQ14938 502 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 KIAA1755Q5JYT7 1200 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 DGKKQ5KSL6 1271 aa4.84□□□□□ -1.63
NPHP3-206ENST00000474871 HES5Q5TA89 166 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms