RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ADGRE3Q9BY15 652 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 UCK1Q9HA47 277 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 ZFYVE1Q9HBF4 777 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 DTLQ9NZJ0 730 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 ZNF624Q9P2J8 865 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-209ENST00000474647 TRIM10Q9UDY6 481 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 VPS4AQ9UN37 437 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 SHOC2Q9UQ13 582 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 ADGRG1Q9Y653 693 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 RGSL1A5PLK6 1076 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 OR52A4PA6NMU1 304 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 TTLL8A6PVC2 850 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 TOX3O15405 576 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-209ENST00000474647 MTX2O75431 263 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 SPAG6O75602 509 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 CREG1O75629 220 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 AGFG2O95081 481 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 ZNF7P17097 686 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-209ENST00000474647 SLC19A1P41440 591 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 CLCNKAP51800 687 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 PMS2P54278 862 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 GBE1Q04446 702 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 GPR18Q14330 331 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 IQCB1Q15051 598 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 ATP13A4Q4VNC1 1196 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 FAM182AQ5T1J6 154 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 ZFYVE27Q5T4F4 411 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 ADGRG6Q86SQ4 1221 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 LRRTM4Q86VH4 590 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 PPP1R3BQ86XI6 285 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 KCTD6Q8NC69 237 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 GPR26Q8NDV2 337 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 CT55Q8WUE5 264 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 ZSCAN5AQ9BUG6 496 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 CBX8Q9HC52 389 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 TRIM39Q9HCM9 518 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 SLC23A2Q9UGH3 650 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 CENPEQ02224 2701 aa13.77□□□□□ -0.21
CCDC78-209ENST00000474647 PIKFYVEQ9Y2I7 2098 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 NUP210LQ5VU65 1888 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 GPR89AB7ZAQ6 455 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 MYO1FO00160 1098 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 KCNK1O00180 336 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 KMOO15229 486 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 JCHAINP01591 159 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 MT-ND3P03897 115 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 PDGFAP04085 211 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 MMP2P08253 660 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 GPR89BP0CG08 455 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 MX2P20592 715 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 GNLYP22749 145 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 DRG2P55039 364 aaKnown RBP13.76□□□□□ -0.21
CCDC78-209ENST00000474647 PPP1CAP62136 330 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 PCSK7Q16549 785 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 PRSS42Q7Z5A4 293 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 CPNE8Q86YQ8 564 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 FAM71BQ8TC56 605 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 GLYATL1Q969I3 302 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 EID2BQ96D98 161 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 HDAC11Q96DB2 347 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 ZNF830Q96NB3 372 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-209ENST00000474647 TSGA13Q96PP4 275 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 ZNF670Q9BS34 389 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 CEP41Q9BYV8 373 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 BRD8Q9H0E9 1235 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 ACTL8Q9H568 366 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 LHX9Q9NQ69 397 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 POT1Q9NUX5 634 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 PADI1Q9ULC6 663 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 ZNF711Q9Y462 761 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 UNC79Q9P2D8 2635 aa13.76□□□□□ -0.21
CCDC78-209ENST00000474647 HIVEP3Q5T1R4 2406 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 SMTNL1A8MU46 457 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 CHUKO15111 745 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 TIAF1O95411 115 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 FGF5P12034 268 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 BRAFP15056 766 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 ARSEP51690 589 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 RPS18P62269 152 aaKnown RBP13.75□□□□□ -0.21
CCDC78-209ENST00000474647 CHAF1BQ13112 559 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 TUBB3Q13509 450 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 KCNAB1Q14722 419 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC78-209ENST00000474647 FHL5Q5TD97 284 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 CYB5D1Q6P9G0 228 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 TRAPPC5Q8IUR0 188 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 TTC30BQ8N4P2 665 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 TRAM1L1Q8N609 369 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 SIDT2Q8NBJ9 832 aaKnown RBP13.75□□□□□ -0.21
CCDC78-209ENST00000474647 GDAP1Q8TB36 358 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 CPT1CQ8TCG5 803 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 FATE1Q969F0 183 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 ZDHHC12Q96GR4 267 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 TIMM29Q9BSF4 260 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 GPR63Q9BZJ6 419 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 PDE7BQ9NP56 450 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 RARRES3Q9UL19 164 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms