RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SRSF11Q05519 484 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 LARS2Q15031 903 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 CCL15Q16663 113 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 HNRNPA1L2Q32P51 320 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF484Q5JVG2 852 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 DUPD1Q68J44 220 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 C1orf94Q6P1W5 598 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 KLHL17Q6TDP4 642 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF365Q70YC5 407 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PALB2Q86YC2 1186 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 CNGA4Q8IV77 575 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 CHERPQ8IWX8 916 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ZDHHC14Q8IZN3 488 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 LINC00518Q8N0U6 118 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 CRIPAKQ8N1N5 446 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 FRMD1Q8N878 549 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 EXD1Q8NHP7 514 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 SPSB4Q96A44 273 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF479Q96JC4 524 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM84AQ96KN4 292 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PTCHD1Q96NR3 888 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 DBNDD2Q9BQY9 259 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ACE2Q9BYF1 805 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 VCX2Q9H322 139 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 GOLPH3LQ9H4A5 285 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 METTL8Q9H825 291 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 VCX3AQ9NNX9 186 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC39A2Q9NP94 309 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TM7SF3Q9NS93 570 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 DZANK1Q9NVP4 752 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 IGSF9Q9P2J2 1179 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 GGA2Q9UJY4 613 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 GINS2Q9Y248 185 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 KCNK7Q9Y2U2 307 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 IFT52Q9Y366 437 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PCDHB5Q9Y5E4 795 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 NFS1Q9Y697 457 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TEX264Q9Y6I9 313 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 RNF215Q9Y6U7 377 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 REV3LO60673 3130 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TRBC2A0A5B9 178 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF839A8K0R7 811 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 A8MX80 341 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC9A3R1O14745 358 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PPM1DO15297 605 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC16A6O15403 523 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PI15O43692 258 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 VPS4BO75351 444 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 F9P00740 461 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 OR8G3PP0DMU2 310 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ACRP10323 421 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PFKLP17858 780 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 NT5EP21589 574 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 FGFR2P21802 821 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 SHMT1P34896 483 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 IL12RB1P42701 662 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC1A1P43005 524 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 CRATP43155 626 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 KHKP50053 298 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF143P52747 638 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 CLDN8P56748 225 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PPP2R2BQ00005 443 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 MAT1AQ00266 395 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ILF2Q12905 390 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 MAB21L1Q13394 359 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 FASTKD3Q14CZ7 662 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 CEBPEQ15744 281 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 NADK2Q4G0N4 442 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 C18orf63Q68DL7 685 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 DTHD1Q6ZMT9 781 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 LRRC70Q7Z2Q7 622 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 KCTD20Q7Z5Y7 419 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 GAS2L3Q86XJ1 694 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 RHPN1Q8TCX5 695 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 NSMCE1Q8WV22 266 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 EID2BQ96D98 161 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 MTFMTQ96DP5 389 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TOX2Q96NM4 488 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TRAPPC9Q96Q05 1148 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PKP2Q99959 881 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PIMREGQ9BSJ6 248 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TUBB6Q9BUF5 446 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 OSBPL6Q9BZF3 934 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TRIM31Q9BZY9 425 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 YIPF3Q9GZM5 350 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 DERL2Q9GZP9 239 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 KCNN2Q9H2S1 579 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 POLR1BQ9H9Y6 1135 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 LTB4R2Q9NPC1 389 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TIMMDC1Q9NPL8 285 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM212BQ9NTI7 297 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 DNAJC28Q9NX36 388 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TRPC4Q9UBN4 977 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 ENOPH1Q9UHY7 261 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 TUBD1Q9UJT1 453 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 LEF1Q9UJU2 399 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 GABRQQ9UN88 632 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 BTBD3Q9Y2F9 522 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms