RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TRIM48Q8IWZ4 208 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 RASGEF1CQ8N431 466 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 RASGEF1AQ8N9B8 481 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 GLIS1Q8NBF1 620 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 AVL9Q8NBF6 648 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SLC37A2Q8TED4 501 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 STYXQ8WUJ0 223 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SH3KBP1Q96B97 665 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 ATXN7L3BQ96GX2 97 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 AHCYL2Q96HN2 611 aaKnown RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 OSBPL9Q96SU4 736 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SLC38A3Q99624 504 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 C19orf43Q9BQ61 176 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 TIMM29Q9BSF4 260 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 AP1M1Q9BXS5 423 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 STRADBQ9C0K7 418 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 PRDM8Q9NQV8 689 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 NLE1Q9NVX2 485 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 KCNK4Q9NYG8 393 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 ATXN7L1Q9ULK2 861 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 HEATR9A2RTY3 570 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 OR2AG2A6NM03 316 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 NTN3O00634 580 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 GAPDHSO14556 408 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 KCNJ13O60928 360 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SUN1O94901 812 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 F3P13726 295 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 PBLDP30039 288 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 GPR3P46089 330 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 CLCNKAP51800 687 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 GNG11P61952 73 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 HHEXQ03014 270 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SEPT7Q16181 437 aaKnown RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 GPR33Q49SQ1 333 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 CCDC38Q502W7 563 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 FNBP1LQ5T0N5 605 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 IYDQ6PHW0 289 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 USP53Q70EK8 1073 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SNX20Q7Z614 316 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 PIM3Q86V86 326 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 AMZ2Q86W34 360 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 C17orf82Q86X59 251 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SFRP1Q8N474 314 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 PRELID2Q8N945 189 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 ZNF514Q96K75 400 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-203ENST00000474047 TMEM74Q96NL1 305 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 EPB41L5Q9HCM4 733 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 SLC23A2Q9UGH3 650 aa14.01□□□□□ -0.17
VAMP4-203ENST00000474047 CACNA1BQ00975 2339 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 KIR2DS5A0A0G2JLQ3 304 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 A0A0G2JNG1 304 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 A0A1W2PQM1 296 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 D6RAR5 112 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 KIR2DS3K7RE56 304 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 CASC3O15234 703 aaKnown RBP14□□□□□ -0.17
VAMP4-203ENST00000474047 PPM1DO15297 605 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 POP7O75817 140 aaKnown RBP14□□□□□ -0.17
VAMP4-203ENST00000474047 EML2O95834 649 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 MPOP05164 745 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 VPS41P49754 854 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 TERF1P54274 439 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 INHBCP55103 352 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 GABREP78334 506 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 XIAPP98170 497 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 B4GALNT1Q00973 533 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 CCDC173Q0VFZ6 552 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 KIR2DS5Q14953 304 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 RTP5Q14D33 572 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 TRIP13Q15645 432 aaPredicted RBP14□□□□□ -0.17
VAMP4-203ENST00000474047 C3orf38Q5JPI3 329 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 ZNF547Q8IVP9 402 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 HEXDCQ8WVB3 486 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 SGF29Q96ES7 293 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 CDKN2AIPNLQ96HQ2 116 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 COPS8Q99627 209 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 FOXP3Q9BZS1 431 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 POLR1BQ9H9Y6 1135 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 TTC7AQ9ULT0 858 aaPredicted RBP14□□□□□ -0.17
VAMP4-203ENST00000474047 SNX12Q9UMY4 172 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 ENTPD2Q9Y5L3 495 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 DNMT3AQ9Y6K1 912 aaPredicted RBP14□□□□□ -0.17
VAMP4-203ENST00000474047 UNC13CQ8NB66 2214 aa14□□□□□ -0.17
VAMP4-203ENST00000474047 USP27XA6NNY8 438 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 AP3B1O00203 1094 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 B4GAT1O43505 415 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 CPNE6O95741 557 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 VIPP01282 170 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 ADRA1DP25100 572 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 RPL10P27635 214 aaKnown RBP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 RBMS1P29558 406 aaKnown RBP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 GRIA1P42261 906 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 HALP42357 657 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 FASLGP48023 281 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 CACNG1Q06432 222 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 PHF19Q5T6S3 580 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 ZNF438Q7Z4V0 828 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 LSMEM2Q8N112 164 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 NXPE1Q8N323 547 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 PPHLN1Q8NEY8 458 aaKnown RBP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 OR10G6Q8NH81 332 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms