RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CDKN1CP49918 316 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-210ENST00000473829 ARSDP51689 593 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 CLCNKAP51800 687 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 BASP1P80723 227 aaKnown RBP18.66■□□□□ 0.58
PTCD3-210ENST00000473829 B4GALNT1Q00973 533 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 SPIDRQ14159 915 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 NR1D2Q14995 579 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 TRIP13Q15645 432 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-210ENST00000473829 CYP1B1Q16678 543 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 ST3GAL2Q16842 350 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 INSCQ1MX18 579 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 TRAPPC5Q8IUR0 188 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 SFRP1Q8N474 314 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 DNAAF3Q8N9W5 541 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 ACTRT1Q8TDG2 376 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 TIMM29Q9BSF4 260 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 LRRN3Q9H3W5 708 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 OSGEPL1Q9H4B0 414 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 PRDM8Q9NQV8 689 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 ATXN7L1Q9ULK2 861 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-210ENST00000473829 ENTPD2Q9Y5L3 495 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 KIF26BQ2KJY2 2108 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 UNC13CQ8NB66 2214 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 A0A1W2PNU3 283 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-210ENST00000473829 TMEM8BA6NDV4 472 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 OR2AG2A6NM03 316 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 D6RAR5 112 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 H7C0S8 307 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 FANCGO15287 622 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 B4GAT1O43505 415 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 TCEA3O75764 348 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 PSMA3P25788 255 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 MSNP26038 577 aaKnown RBP18.65■□□□□ 0.58
PTCD3-210ENST00000473829 HADHAP40939 763 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 VPS41P49754 854 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 OR1D5P58170 312 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 CYP4F3Q08477 520 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 CCDC173Q0VFZ6 552 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 GTF2H3Q13889 308 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 IYDQ6PHW0 289 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 DET1Q7L5Y6 550 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 TMPRSS9Q7Z410 1059 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 B3GNT8Q7Z7M8 397 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 STYXQ8WUJ0 223 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 MAGOHBQ96A72 148 aaKnown RBP18.65■□□□□ 0.58
PTCD3-210ENST00000473829 TTC25Q96NG3 672 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 ZCCHC2Q9C0B9 1178 aaKnown RBP18.65■□□□□ 0.58
PTCD3-210ENST00000473829 EIF2B3Q9NR50 452 aaKnown RBP18.65■□□□□ 0.58
PTCD3-210ENST00000473829 SCHIP1Q9P0W5 487 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-210ENST00000473829 SLC2A6Q9UGQ3 507 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTCD3-210ENST00000473829 ZZEF1O43149 2961 aa18.65■□□□□ 0.58
PTCD3-210ENST00000473829 TCRBV7S3A2A0A539 114 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 PMS2P1A4D2B8 440 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 RHPN2P1A8MT19 583 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 TAF4O00268 1085 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 CES2O00748 559 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 SGTAO43765 313 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 F3P13726 295 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 ITGALP20701 1170 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 AKT1P31749 480 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 COILP38432 576 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-210ENST00000473829 FASLGP48023 281 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 GNG11P61952 73 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-210ENST00000473829 TMEM220Q6QAJ8 160 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 C4orf22Q6V702 233 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 SNX20Q7Z614 316 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 ZNF761Q86XN6 746 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-210ENST00000473829 NXPE1Q8N323 547 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 BEND7Q8N7W2 519 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-210ENST00000473829 OR13J1Q8NGT2 312 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 WDR48Q8TAF3 677 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 ATXN7L3BQ96GX2 97 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 CDKN2AIPNLQ96HQ2 116 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 ZNF778Q96MU6 729 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 GFM1Q96RP9 751 aaKnown RBP18.64■□□□□ 0.57
PTCD3-210ENST00000473829 NRSN2Q9GZP1 204 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 CCDC86Q9H6F5 360 aaKnown RBP18.64■□□□□ 0.57
PTCD3-210ENST00000473829 CRLS1Q9UJA2 301 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 ZMIZ1Q9ULJ6 1067 aa18.64■□□□□ 0.57
PTCD3-210ENST00000473829 TRBV5-4A0A0C4DH59 114 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 OR51F1A6NGY5 319 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 BRAFP15056 766 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 MSH3P20585 1137 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 ALDH4A1P30038 563 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 TERF1P54274 439 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 RTP5Q14D33 572 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 SEPT7Q16181 437 aaKnown RBP18.63■□□□□ 0.57
PTCD3-210ENST00000473829 ZRANB3Q5FWF4 1079 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 FNBP1LQ5T0N5 605 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 XKR5Q6UX68 686 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 FAM83HQ6ZRV2 1179 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-210ENST00000473829 ZNF534Q76KX8 674 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 PIANPQ8IYJ0 282 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 NXPE2Q96DL1 559 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 SGF29Q96ES7 293 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 RANBP9Q96S59 729 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 NAP1L3Q99457 506 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-210ENST00000473829 FOXP3Q9BZS1 431 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms