RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 POLR1CO15160 346 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-210ENST00000472880 STK17BO94768 372 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 CDK14O94921 469 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 ANKRD34CP0C6C1 535 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 PTPN3P26045 913 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 NR2C2P49116 596 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 GFERP55789 205 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 GTF2H3Q13889 308 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 PRKD1Q15139 912 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-210ENST00000472880 TMEM26Q6ZUK4 368 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 GDAP1Q8TB36 358 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 TFB1MQ8WVM0 346 aaKnown RBP19.46■□□□□ 0.71
COL9A3-210ENST00000472880 SLC45A3Q96JT2 553 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 TEKT5Q96M29 485 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 VPS35Q96QK1 796 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 TRIT1Q9H3H1 467 aaKnown RBP19.46■□□□□ 0.71
COL9A3-210ENST00000472880 POT1Q9NUX5 634 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 SCHIP1Q9P0W5 487 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-210ENST00000472880 SLC23A2Q9UGH3 650 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 SPO11Q9Y5K1 396 aa19.46■□□□□ 0.71
COL9A3-210ENST00000472880 SETXQ7Z333 2677 aaKnown RBP19.46■□□□□ 0.71
COL9A3-210ENST00000472880 AURKAO14965 403 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 UBXN7O94888 489 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 TYRP1P17643 537 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 AMD1P17707 334 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 VCLP18206 1134 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 COMTP21964 271 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 CCR10P46092 362 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 POLE2P56282 527 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 TRAPPC5Q8IUR0 188 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 CNGA4Q8IV77 575 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 C9orf72Q96LT7 481 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 TGM7Q96PF1 710 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 SPRY4Q9C004 299 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 BPIFA1Q9NP55 256 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 OGFRQ9NZT2 677 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 SAE1Q9UBE0 346 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-210ENST00000472880 FAM153AQ9UHL3 310 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 INTUQ9ULD6 942 aa19.45■□□□□ 0.7
COL9A3-210ENST00000472880 TMEM184BQ9Y519 407 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-210ENST00000472880 MTSS1O43312 755 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 PSTPIP1O43586 416 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 CST8O60676 142 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 C9P02748 559 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 PRKAR1AP10644 381 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 NFKB1P19838 968 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 IDSP22304 550 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 RPL10P27635 214 aaKnown RBP19.44■□□□□ 0.7
COL9A3-210ENST00000472880 SLC19A1P41440 591 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 CDKN2BP42772 138 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 CSRP3P50461 194 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 FOXM1Q08050 763 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 ABHD18Q0P651 414 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 KCNAB2Q13303 367 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 ATP13A5Q4VNC0 1218 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 KHDC1Q4VXA5 237 aaKnown RBP19.44■□□□□ 0.7
COL9A3-210ENST00000472880 KAZNQ674X7 775 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 TIPARPQ7Z3E1 657 aaKnown RBP19.44■□□□□ 0.7
COL9A3-210ENST00000472880 ZNF547Q8IVP9 402 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 UNC5BQ8IZJ1 945 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 CXorf40BQ96DE9 158 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 TRABDQ9H4I3 376 aa19.44■□□□□ 0.7
COL9A3-210ENST00000472880 SIDT1Q9NXL6 827 aaKnown RBP19.44■□□□□ 0.7
COL9A3-210ENST00000472880 KLHL8Q9P2G9 620 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-210ENST00000472880 ZNF624Q9P2J8 865 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-210ENST00000472880 ZNF106Q9H2Y7 1883 aaKnown RBP19.43■□□□□ 0.7
COL9A3-210ENST00000472880 BOD1L1Q8NFC6 3051 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 LOC101059948A0A1B0GTJ6 334 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 TERTO14746 1132 aaKnown RBP19.43■□□□□ 0.7
COL9A3-210ENST00000472880 SUV39H1O43463 412 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 RASSF9O75901 435 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 PECAM1P16284 738 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-210ENST00000472880 HMGCLP35914 325 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 WNT3AP56704 352 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 CDC20Q12834 499 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 TCEAL1Q15170 157 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 ZDHHC20Q5W0Z9 365 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 ABRAXAS1Q6UWZ7 409 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 SPOCD1Q6ZMY3 1216 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 RBM12BQ8IXT5 1001 aaKnown RBP19.43■□□□□ 0.7
COL9A3-210ENST00000472880 ESX1Q8N693 406 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 RNF214Q8ND24 703 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 P3H4Q92791 437 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 TTC25Q96NG3 672 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 ZCCHC2Q9C0B9 1178 aaKnown RBP19.43■□□□□ 0.7
COL9A3-210ENST00000472880 IL17BQ9UHF5 180 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 TUBD1Q9UJT1 453 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 SLC30A1Q9Y6M5 507 aa19.43■□□□□ 0.7
COL9A3-210ENST00000472880 FLNBO75369 2602 aaKnown RBP19.43■□□□□ 0.7
COL9A3-210ENST00000472880 PRR19A6NJB7 356 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 OR52A4PA6NMU1 304 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 TOX3O15405 576 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-210ENST00000472880 NKX2-8O15522 239 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 DLGAP3O95886 979 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 BRAFP15056 766 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 CD68P34810 354 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-210ENST00000472880 SPAM1P38567 509 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 HALP42357 657 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 CAPZBP47756 277 aa19.42■□□□□ 0.7
COL9A3-210ENST00000472880 SEPHS1P49903 392 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms