RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 THAP12O43422 761 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SLC28A2O43868 658 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SDC3O75056 442 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 C1QL1O75973 258 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 LETM1O95202 739 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 LSM8O95777 96 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 WNT1P04628 370 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 LIPCP11150 499 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SRCP12931 536 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 ADRB3P13945 408 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 COMTP21964 271 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 KELP23276 732 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CD40P25942 277 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 OR1E1P30953 314 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CHRNA3P32297 505 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 MAN1A1P33908 653 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 KRT9P35527 623 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 PRCPP42785 496 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 GPD2P43304 727 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 STK19P49842 368 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 SERPINH1P50454 418 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 CSRP3P50461 194 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 PEX5P50542 639 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SGSHP51688 502 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SNRPD1P62314 119 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 ADCY2Q08462 1091 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 ELP6Q0PNE2 266 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 LRMPQ12912 555 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 PRKD1Q15139 912 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 SHBQ15464 509 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 ISXQ2M1V0 245 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 C5orf22Q49AR2 442 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 FSCBQ5H9T9 825 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 C3orf38Q5JPI3 329 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CFAP58Q5T655 872 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 PIP5KL1Q5T9C9 394 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 C1QL3Q5VWW1 255 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 NADSYN1Q6IA69 706 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CXorf57Q6NSI4 855 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 FBXL22Q6P050 247 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 C22orf39Q6P5X5 142 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 INO80CQ6PI98 192 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 MACC1Q6ZN28 852 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SLC26A9Q7LBE3 791 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 C14orf80Q86SX3 495 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CXorf67Q86X51 503 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 GKN2Q86XP6 184 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SPATS2Q86XZ4 545 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 FAM114A1Q8IWE2 563 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CFAP52Q8N1V2 620 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 ZNF808Q8N4W9 903 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 LILRA3Q8N6C8 439 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 ZNF397Q8NF99 534 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 ISG20Q96AZ6 181 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 PGAP3Q96FM1 320 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 P2RY11Q96G91 374 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 VCPIP1Q96JH7 1222 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 PPP1R13BQ96KQ4 1090 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 C1orf74Q96LT6 269 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SLC46A1Q96NT5 459 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 LENG8Q96PV6 779 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 CCNL2Q96S94 520 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 CMKLR1Q99788 373 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 PRMT1Q99873 361 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 SLC17A9Q9BYT1 436 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 ZYG11BQ9C0D3 744 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 INTS2Q9H0H0 1204 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 PDCL3Q9H2J4 239 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 WDCPQ9H6R7 721 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 KCTD5Q9NXV2 234 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 APOBEC3BQ9UH17 382 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 DNAI1Q9UI46 699 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SLCO3A1Q9UIG8 710 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 INTS6Q9UL03 887 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 VANGL2Q9ULK5 521 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CNTN6Q9UQ52 1028 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 NAALADL1Q9UQQ1 740 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 DAAM1Q9Y4D1 1078 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 TESMINQ9Y4I5 508 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SLCO1B1Q9Y6L6 691 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 ATG2BQ96BY7 2078 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CFAP46Q8IYW2 2715 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 BOD1L1Q8NFC6 3051 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 GON4LQ3T8J9 2241 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 IGLV3-10A0A075B6K4 115 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SYNJ2BP-COX16A0A087WUM0 186 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 GOLGA6L7A0A1B0GV03 622 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 A0A1W2PQ67 120 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ANKRD62A6NC57 917 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CDRT15L2A8MXV6 281 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 D6RAR5 112 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 OVOL3O00110 214 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CYR61O00622 381 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 TRIM38O00635 465 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SLC31A1O15431 190 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 RAMP2O60895 175 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 TMEM127O75204 238 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PPFIA2O75334 1257 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ADCY5O95622 1261 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 IGSF6O95976 241 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms