RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 CACNA2D3Q8IZS8 1091 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 NLGN4XQ8N0W4 816 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 NLGN4YQ8NFZ3 816 aaPredicted RBP13.8□□□□□ -0.2
RTKN-207ENST00000472518 P3H4Q92791 437 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
RTKN-207ENST00000472518 EID2BQ96D98 161 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 RBM41Q96IZ5 413 aaKnown RBP13.8□□□□□ -0.2
RTKN-207ENST00000472518 KLC4Q9NSK0 619 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 STARD5Q9NSY2 213 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 TRHDEQ9UKU6 1024 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 SHOC2Q9UQ13 582 aa13.8□□□□□ -0.2
RTKN-207ENST00000472518 LOC285095A0A1B0GVY8 99 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 CST8O60676 142 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 SNX2O60749 519 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 CDK14O94921 469 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 EML2O95834 649 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 C9P02748 559 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 BPIP17213 487 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 COMTP21964 271 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 IDSP22304 550 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 DYNLT1P63172 113 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 ABHD18Q0P651 414 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 MPP3Q13368 585 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 ITGA9Q13797 1035 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 PPP2R5EQ16537 467 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 LDLRAP1Q5SW96 308 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 ALS2CLQ60I27 953 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 BORAQ6PGQ7 559 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 ABRAXAS1Q6UWZ7 409 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 TMEM26Q6ZUK4 368 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 CCDC170Q8IYT3 715 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 KATNAL2Q8IYT4 538 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 RCOR2Q8IZ40 523 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 LRRN4Q8WUT4 740 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 EXTL1Q92935 676 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 RTP4Q96DX8 246 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 SLC45A3Q96JT2 553 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 TTC25Q96NG3 672 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 PPP1R2P1Q96PQ5 205 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 FCRL5Q96RD9 977 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 SLC12A9Q9BXP2 914 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 OSGEPL1Q9H4B0 414 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 GEMIN8Q9NWZ8 242 aaKnown RBP13.79□□□□□ -0.2
RTKN-207ENST00000472518 OCIAD1Q9NX40 245 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 TMEM9Q9P0T7 183 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 PILRAQ9UKJ1 303 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 PRKAB1Q9Y478 270 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 TMEM184BQ9Y519 407 aaPredicted RBP13.79□□□□□ -0.2
RTKN-207ENST00000472518 PCYT1BQ9Y5K3 369 aaPredicted RBP13.79□□□□□ -0.2
RTKN-207ENST00000472518 DNMT3AQ9Y6K1 912 aaPredicted RBP13.79□□□□□ -0.2
RTKN-207ENST00000472518 MYO9AB2RTY4 2548 aa13.79□□□□□ -0.2
RTKN-207ENST00000472518 TRBV23OR9-2A0A075B6M9 112 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 PRR19A6NJB7 356 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 POLR1CO15160 346 aaPredicted RBP13.78□□□□□ -0.2
RTKN-207ENST00000472518 SLC28A2O43868 658 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 ZRANB2O95218 330 aaKnown RBP eCLIP13.78□□□□□ -0.2
RTKN-207ENST00000472518 MT-CYBP00156 380 aaPredicted RBP13.78□□□□□ -0.2
RTKN-207ENST00000472518 MPSTP25325 297 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 SPAM1P38567 509 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 HALP42357 657 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 ARSDP51689 593 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 XRCC4Q13426 336 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 TBR1Q16650 682 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 ANKS6Q68DC2 871 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 C11orf63Q6NUN7 778 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 KLHL35Q6PF15 583 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 NPNTQ6UXI9 565 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 SPOCD1Q6ZMY3 1216 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 ZNF761Q86XN6 746 aaPredicted RBP13.78□□□□□ -0.2
RTKN-207ENST00000472518 ESX1Q8N693 406 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 EXD3Q8N9H8 876 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 SPATA22Q8NHS9 363 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 ZNF514Q96K75 400 aaPredicted RBP13.78□□□□□ -0.2
RTKN-207ENST00000472518 CEP41Q9BYV8 373 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 RAB33BQ9H082 229 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 PRDM8Q9NQV8 689 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 KLHL8Q9P2G9 620 aaPredicted RBP13.78□□□□□ -0.2
RTKN-207ENST00000472518 ALG6Q9Y672 507 aa13.78□□□□□ -0.2
RTKN-207ENST00000472518 ZNF106Q9H2Y7 1883 aaKnown RBP13.78□□□□□ -0.2
RTKN-207ENST00000472518 AGRPO00253 132 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 PMPCBO75439 489 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 UBXN7O94888 489 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 WISP1O95388 367 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 LCA5LO95447 670 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 SLC4A1P02730 911 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 PIRTP0C851 137 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 PYGMP11217 842 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 LIFP15018 202 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 AMD1P17707 334 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 MAGEA1P43355 309 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 MAPK9P45984 424 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 CAPZBP47756 277 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 WNT3AP56704 352 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 COPS2P61201 443 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 DMPKQ09013 629 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 WASHC5Q12768 1159 aa13.77□□□□□ -0.21
RTKN-207ENST00000472518 TMEM115Q12893 351 aaPredicted RBP13.77□□□□□ -0.21
RTKN-207ENST00000472518 NFATC3Q12968 1075 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms