RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 XAGE5Q8WWM1 108 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 ITCHQ96J02 903 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 VPS35Q96QK1 796 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 SH3GL3Q99963 347 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 TRPS1Q9UHF7 1281 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 RPS6KA6Q9UK32 745 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 PHF24Q9UPV7 400 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 LRCH1Q9Y2L9 728 aa8.51□□□□□ -1.05
CD47-204ENST00000471694 PCDHGA12O60330 932 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 IQCF3P0C7M6 154 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 WARSP23381 471 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 SLC6A9P48067 706 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 ITGB3BPQ13352 177 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 MSLNQ13421 630 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 AUHQ13825 339 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 OTUD3Q5T2D3 398 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 NT5DC1Q5TFE4 455 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 USP53Q70EK8 1073 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SERPINA9Q86WD7 417 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 FBXO30Q8TB52 745 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 EPS8L3Q8TE67 593 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 RNF145Q96MT1 663 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 KBTBD4Q9NVX7 518 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 TAS2R14Q9NYV8 317 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 ZNF490Q9ULM2 529 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 HPSEQ9Y251 543 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 AP3M1Q9Y2T2 418 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 MFHAS1Q9Y4C4 1052 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 CXCR1P25024 350 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 BMPR1AP36894 532 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 GRK6P43250 576 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 CLCNKAP51800 687 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SCRN3Q0VDG4 424 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 C12orf40Q86WS4 652 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SNX32Q86XE0 403 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 ARMC5Q96C12 935 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 FAM83CQ9BQN1 747 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 TBC1D10AQ9BXI6 508 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 KCNH6Q9H252 994 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 TCF7L2Q9NQB0 619 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 MED31Q9Y3C7 131 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SIT1Q9Y3P8 196 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 TRIM64BA6NI03 449 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 GNB5O14775 395 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 EPHB6O15197 1021 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 NDUFS4O43181 175 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 UGT2B17O75795 530 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 DBIP07108 87 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 HNRNPA1P09651 372 aaKnown RBP eCLIP8.5□□□□□ -1.05
CD47-204ENST00000471694 ABOP16442 354 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 PRR5P85299 388 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 DSC2Q02487 901 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SPIRE1Q08AE8 756 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 C1orf61Q13536 156 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 ARMCX4Q5H9R4 360 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 ULK2Q8IYT8 1036 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 EFHD2Q96C19 240 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 ZNF576Q9H609 170 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 TMEM98Q9Y2Y6 226 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 COL14A1Q05707 1796 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 C9IYK1 514 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SCDO00767 359 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 COL6A1P12109 1028 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 ITGB5P18084 799 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 BTN3A2P78410 334 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 MRPL49Q13405 166 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 UNC5AQ6ZN44 842 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 Q6ZVU0 165 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SPATA6LQ8N4H0 392 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 ZSWIM3Q96MP5 696 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 RIOK2Q9BVS4 552 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 SUV39H2Q9H5I1 410 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 RSL1D1O76021 490 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 APBB3O95704 486 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 GYPCP04921 128 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 PREPP48147 710 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 CDKN1CP49918 316 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 CCR8P51685 355 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 RPS21P63220 83 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 AGBL2Q5U5Z8 902 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 TRIQKQ629K1 86 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 DQX1Q8TE96 717 aaKnown RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 CENPIQ92674 756 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 ISCUQ9H1K1 167 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 CCNB1IP1Q9NPC3 277 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 HEY2Q9UBP5 337 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 CFL2Q9Y281 166 aa8.5□□□□□ -1.05
CD47-204ENST00000471694 SPIN1Q9Y657 262 aaPredicted RBP8.5□□□□□ -1.05
CD47-204ENST00000471694 PRMT5O14744 637 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 TNFRSF10BO14763 440 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 IDH3BO43837 385 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 NDST3O95803 873 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PRLRP16471 622 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 ICAM3P32942 547 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PCYT1AP49585 367 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 MC1RQ01726 317 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 MAPKAPK3Q16644 382 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 EXOC3L1Q86VI1 746 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RAB43Q86YS6 212 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 LIX1LQ8IVB5 337 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms