RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZBTB44Q8NCP5 570 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 ELMO2Q96JJ3 720 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 RUFY1Q96T51 708 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 AARSD1Q9BTE6 412 aaKnown RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CLPBQ9H078 707 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CENPHQ9H3R5 247 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CAAP1Q9H8G2 361 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 GALPQ9UBC7 116 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 OR2AG2A6NM03 316 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 TRIM49D1C9J1S8 452 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 NIPSNAP2O75323 286 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CDK14O94921 469 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 FUCA1P04066 466 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 WNT1P04628 370 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 ITPKAP23677 461 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 DHPSP49366 369 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 SERPINB9P50453 376 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CDKN2DP55273 166 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 HECTD2Q5U5R9 776 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 PMS2CLQ68D20 193 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 KYAT3Q6YP21 454 aaKnown RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 BEND7Q8N7W2 519 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 C1orf216Q8TAB5 229 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 MZB1Q8WU39 189 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 DNASE2BQ8WZ79 361 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 GPR22Q99680 433 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 OLFM1Q99784 485 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 PPCSQ9HAB8 311 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 SLC39A10Q9ULF5 831 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 VPS9D1Q9Y2B5 631 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 MED16Q9Y2X0 877 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 PRKAB1Q9Y478 270 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CEP192Q8TEP8 1941 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 GON4LQ3T8J9 2241 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 A0A1W2PPM1 405 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 CACNB4O00305 520 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-203ENST00000471658 SNRPAP09012 282 aaKnown RBP18.95■□□□□ 0.62
PSPC1-203ENST00000471658 MYCLP1P12525 358 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-203ENST00000471658 RPS3P23396 243 aaKnown RBP eCLIP18.95■□□□□ 0.62
PSPC1-203ENST00000471658 GMPRP36959 345 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 TAS2R39P59534 338 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 RASA2Q15283 850 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 PTRHD1Q6GMV3 140 aaKnown RBP18.95■□□□□ 0.62
PSPC1-203ENST00000471658 TMEM220Q6QAJ8 160 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 CEP68Q76N32 757 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 CMC1Q7Z7K0 106 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 TM9SF3Q9HD45 589 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 MRPL40Q9NQ50 206 aaKnown RBP18.95■□□□□ 0.62
PSPC1-203ENST00000471658 LGALS13Q9UHV8 139 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 VWA7Q9Y334 891 aa18.95■□□□□ 0.62
PSPC1-203ENST00000471658 THADAQ6YHU6 1953 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 ATXN2Q99700 1313 aaKnown RBP18.94■□□□□ 0.62
PSPC1-203ENST00000471658 A0A1W2PR77 199 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 A6NNZ2 444 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 CFAP99D6REC4 459 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 SCAMP1O15126 338 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 KRT38O76015 456 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 ESR1P03372 595 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 CEACAM5P06731 702 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 ADARP55265 1226 aaKnown RBP18.94■□□□□ 0.62
PSPC1-203ENST00000471658 ZNF460Q14592 562 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 USP10Q14694 798 aaKnown RBP18.94■□□□□ 0.62
PSPC1-203ENST00000471658 NFATC4Q14934 902 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 ENPP7Q6UWV6 458 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 NAPRTQ6XQN6 538 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 MACC1Q6ZN28 852 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 USP34Q70CQ2 3546 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 CEP97Q8IW35 865 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 SLC22A18ASQ8N1D0 253 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 ARL8AQ96BM9 186 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 SLC30A3Q99726 388 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 TMBIM4Q9HC24 238 aa18.94■□□□□ 0.62
PSPC1-203ENST00000471658 PNMA8BQ9ULN7 279 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-203ENST00000471658 IQANK1A0A1B0GTG1 560 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 RGS16O15492 202 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-203ENST00000471658 VEGFDO43915 354 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 KRT37O76014 449 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 RHOBTB1O94844 696 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 TRIM16O95361 564 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 HOXC4P09017 264 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-203ENST00000471658 THEGLP0DJG4 465 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 RALBP11234 206 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 KIAA1024LP59773 190 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 YPEL5P62699 121 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 PIM3Q86V86 326 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 RIBC1Q8N443 379 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-203ENST00000471658 HEXDCQ8WVB3 486 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 LRFN3Q9BTN0 628 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 CCDC68Q9H2F9 335 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 FGF22Q9HCT0 170 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 MOSPD1Q9UJG1 213 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 GNPTGQ9UJJ9 305 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 PCDHB1Q9Y5F3 818 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 WDFY4Q6ZS81 3184 aa18.93■□□□□ 0.62
PSPC1-203ENST00000471658 LILRB5O75023 590 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 DNAJC6O75061 913 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 ALDOAP04075 364 aaKnown RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 MYZAPP0CAP1 466 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 KRT15P19012 456 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 CHRM3P20309 590 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms