RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 KRT14P02533 472 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 IVLP07476 585 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 CR2P20023 1033 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 NFKBIAP25963 317 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 AK4P27144 223 aaPredicted RBP9□□□□□ -0.97
SF3A1-206ENST00000471037 VIPR1P32241 457 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 UGT1A3P35503 534 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 HSPA9P38646 679 aaKnown RBP9□□□□□ -0.97
SF3A1-206ENST00000471037 SCNN1BP51168 640 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 IFI35P80217 286 aaPredicted RBP9□□□□□ -0.97
SF3A1-206ENST00000471037 CDK3Q00526 305 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 CTBSQ01459 385 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 LBRQ14739 615 aaKnown RBP9□□□□□ -0.97
SF3A1-206ENST00000471037 TMCO4Q5TGY1 634 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 ARHGAP36Q6ZRI8 547 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 PAF1Q8N7H5 531 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 MYRIPQ8NFW9 859 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 PATE1Q8WXA2 126 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 SCARF2Q96GP6 870 aaPredicted RBP9□□□□□ -0.97
SF3A1-206ENST00000471037 SPATA13Q96N96 652 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 ASPSCR1Q9BZE9 553 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 PAK5Q9P286 719 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 PDP2Q9P2J9 529 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 SEPT3Q9UH03 358 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 ASIC3Q9UHC3 531 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 TRHDEQ9UKU6 1024 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 SUFUQ9UMX1 484 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 SLC17A4Q9Y2C5 497 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 UTP11Q9Y3A2 253 aaKnown RBP9□□□□□ -0.97
SF3A1-206ENST00000471037 NEU2Q9Y3R4 380 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 B3GALT1Q9Y5Z6 326 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 A8MX80 341 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 B4E171 279 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 KCNK1O00180 336 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 PPM1DO15297 605 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CAPN5O15484 640 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CPP00450 1065 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 TUBBP07437 444 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 RHOXF2BP0C7M4 288 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CYP2A6P11509 494 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 LIFP15018 202 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 LHCGRP22888 699 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 PTPN3P26045 913 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CSF2RBP32927 897 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CSTF2P33240 577 aaKnown RBP eCLIP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 ETV3P41162 512 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 TSPAN7P41732 249 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 GNPDA1P46926 289 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 FASLGP48023 281 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 DRG2P55039 364 aaKnown RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 GDF10P55107 478 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 POLE2P56282 527 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 RAB15P59190 212 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 GPLD1P80108 840 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 DPTQ07507 201 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 SLC10A7Q0GE19 358 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 WASHC5Q12768 1159 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 KCNAB2Q13303 367 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 TEX44Q53QW1 395 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 RALGPS1Q5JS13 557 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 ITPRIPL1Q6GPH6 555 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 TMEM71Q6P5X7 295 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 SLC30A9Q6PML9 568 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 B4GALNT4Q76KP1 1039 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CACNA2D3Q8IZS8 1091 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 BBS5Q8N3I7 341 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 TEX26Q8N6G2 289 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 IL22RA1Q8N6P7 574 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 PTCD2Q8WV60 388 aaKnown RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 JPH3Q8WXH2 748 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 ART4Q93070 314 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 LRRC45Q96CN5 670 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 SLC45A3Q96JT2 553 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CATSPER2Q96P56 530 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 TEFMQ96QE5 360 aaKnown RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 MCCC1Q96RQ3 725 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 NUDCD1Q96RS6 583 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 RHOXF2Q9BQY4 288 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 TRIM51Q9BSJ1 452 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 C10orf88Q9H8K7 445 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 KLHL8Q9P2G9 620 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 PHTF1Q9UMS5 762 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 PCDHGC4Q9Y5F7 938 aa8.99□□□□□ -0.97
SF3A1-206ENST00000471037 ARHGEF17Q96PE2 2063 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-206ENST00000471037 CLEC18AA5D8T8 446 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ZNF891A8MT65 544 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-206ENST00000471037 CTIFO43310 598 aaKnown RBP8.98□□□□□ -0.97
SF3A1-206ENST00000471037 RAD1O60671 282 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 PEX11BO96011 259 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 SOD1P00441 154 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 JCHAINP01591 159 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 MCM3P25205 808 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 RPL22P35268 128 aaKnown RBP8.98□□□□□ -0.97
SF3A1-206ENST00000471037 FDFT1P37268 417 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ADCY8P40145 1251 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 CASRP41180 1078 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ACTR1BP42025 376 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 MMP13P45452 471 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms