RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	LRMDA	Q9H2I8	198 aa		5.23	□□□□□ -1.57
SSB-209	ENST00000470621	MARCH4	Q9P2E8	410 aa	Predicted RBP	5.23	□□□□□ -1.57
SSB-209	ENST00000470621	ITIH6	Q6UXX5	1313 aa		5.23	□□□□□ -1.57
SSB-209	ENST00000470621		A0A1W2PR77	199 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	AP3D1	O14617	1153 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	SMAD9	O15198	467 aa	Known RBP	5.22	□□□□□ -1.57
SSB-209	ENST00000470621	TPPP	O94811	219 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	RB1	P06400	928 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	SRPRA	P08240	638 aa	Known RBP	5.22	□□□□□ -1.57
SSB-209	ENST00000470621	NR1D1	P20393	614 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	HRH2	P25021	359 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	PRAME	P78395	509 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	LRMP	Q12912	555 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	IRF3	Q14653	427 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	C9orf50	Q5SZB4	431 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	ZNF704	Q6ZNC4	412 aa	Predicted RBP	5.22	□□□□□ -1.57
SSB-209	ENST00000470621	MARK2	Q7KZI7	788 aa	Known RBP	5.22	□□□□□ -1.57
SSB-209	ENST00000470621	EMC1	Q8N766	993 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	LMNTD1	Q8N9Z9	388 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	PHF21A	Q96BD5	680 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	NEUROD6	Q96NK8	337 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	OGFR	Q9NZT2	677 aa		5.22	□□□□□ -1.57
SSB-209	ENST00000470621	TMEM184B	Q9Y519	407 aa	Predicted RBP	5.22	□□□□□ -1.57
SSB-209	ENST00000470621	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621		A0A0B4J293	547 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	PTGES3L	E9PB15	166 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	P2RY10	O00398	339 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	ZNF217	O75362	1048 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	IGKV3-20	P01619	116 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	HIST1H2AB	P04908	130 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	ATP1A1	P05023	1023 aa	Known RBP	5.21	□□□□□ -1.58
SSB-209	ENST00000470621	SELL	P14151	372 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	TMEM11	P17152	192 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	HIST1H2AD	P20671	130 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	CD81	P60033	236 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	RPL24	P83731	157 aa	Known RBP	5.21	□□□□□ -1.58
SSB-209	ENST00000470621	CRYM	Q14894	314 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	HIST3H2A	Q7L7L0	130 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	NFE4	Q86UQ8	179 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	CEP97	Q8IW35	865 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	GSDMB	Q8TAX9	411 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	TMEM255B	Q8WV15	326 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	DNAAF4	Q8WXU2	420 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	OXNAD1	Q96HP4	312 aa	Predicted RBP	5.21	□□□□□ -1.58
SSB-209	ENST00000470621	TRMT61B	Q9BVS5	477 aa	Known RBP	5.21	□□□□□ -1.58
SSB-209	ENST00000470621	MAF1	Q9H063	256 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	TSPYL4	Q9UJ04	414 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	NENF	Q9UMX5	172 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	FAF1	Q9UNN5	650 aa	Predicted RBP	5.21	□□□□□ -1.58
SSB-209	ENST00000470621	CMAHP	Q9Y471	501 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	PRAG1	Q86YV5	1406 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	SMCHD1	A6NHR9	2005 aa		5.21	□□□□□ -1.58
SSB-209	ENST00000470621	ZBED4	O75132	1171 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	PON1	P27169	355 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	AHR	P35869	848 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	ARCN1	P48444	511 aa	Known RBP	5.2	□□□□□ -1.58
SSB-209	ENST00000470621	EEF1A1	P68104	462 aa	Known RBP	5.2	□□□□□ -1.58
SSB-209	ENST00000470621	RARS2	Q5T160	578 aa	Known RBP	5.2	□□□□□ -1.58
SSB-209	ENST00000470621	EEF1A1P5	Q5VTE0	462 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	C19orf48	Q6RUI8	117 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	TICAM1	Q8IUC6	712 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	DCUN1D3	Q8IWE4	304 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	TEX11	Q8IYF3	940 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	HACE1	Q8IYU2	909 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	ADGRF2	Q8IZF7	708 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	DMBX1	Q8NFW5	382 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	NCAPG	Q9BPX3	1015 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	LRRC1	Q9BTT6	524 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	TMEM39B	Q9GZU3	492 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	TCP11L1	Q9NUJ3	509 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	ZNF112	Q9UJU3	913 aa		5.2	□□□□□ -1.58
SSB-209	ENST00000470621	FSD2	A1L4K1	749 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	TMEM8B	A6NDV4	472 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	AGAP14	A8MT82	685 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	TMEM189-UBE2V1	I3L0A0	370 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621		J3QR06	171 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	DVL1	O14640	695 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	VILL	O15195	856 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	GPC4	O75487	556 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	GJB3	O75712	270 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	TUBB	P07437	444 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	GM2A	P17900	193 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	DVL1P1	P54792	670 aa	Predicted RBP	5.19	□□□□□ -1.58
SSB-209	ENST00000470621	LINC01547	P58512	204 aa	Predicted RBP	5.19	□□□□□ -1.58
SSB-209	ENST00000470621	PPP2R2B	Q00005	443 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	UBE2V1	Q13404	147 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	MVP	Q14764	893 aa	Known RBP	5.19	□□□□□ -1.58
SSB-209	ENST00000470621	PDSS1	Q5T2R2	415 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	FAM205BP	Q63HN1	556 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	C4orf50	Q6ZRC1	276 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	PIWIL4	Q7Z3Z4	852 aa	Known RBP	5.19	□□□□□ -1.58
SSB-209	ENST00000470621	GALNT13	Q8IUC8	556 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	SCYL3	Q8IZE3	742 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	SLC5A8	Q8N695	610 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	LRRC8C	Q8TDW0	803 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	PGAM5	Q96HS1	289 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	UHRF2	Q96PU4	802 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	NUDCD1	Q96RS6	583 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	SEMA6A	Q9H2E6	1030 aa		5.19	□□□□□ -1.58
SSB-209	ENST00000470621	TRPC7	Q9HCX4	862 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms