RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 C4orf22Q6V702 233 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 RAB11FIP2Q7L804 512 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 KDELC2Q7Z4H8 507 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 ZNF438Q7Z4V0 828 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 HSD11B1LQ7Z5J1 315 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 SPRED1Q7Z699 444 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 TECPR1Q7Z6L1 1165 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 TAF8Q7Z7C8 310 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 CCNJLQ8IV13 435 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 SLITRK4Q8IW52 837 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 BBS5Q8N3I7 341 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 BBOF1Q8ND07 529 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 PIH1D2Q8WWB5 315 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 SCARF2Q96GP6 870 aaPredicted RBP11.47□□□□□ -0.57
HLA-C-206ENST00000470363 FCRL5Q96RD9 977 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 APOL2Q9BQE5 337 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 FRMD8Q9BZ67 464 aaPredicted RBP11.47□□□□□ -0.57
HLA-C-206ENST00000470363 SLC25A51Q9H1U9 297 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 WDR26Q9H7D7 661 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 PIH1D1Q9NWS0 290 aaKnown RBP11.47□□□□□ -0.57
HLA-C-206ENST00000470363 AHCTF1Q8WYP5 2266 aa11.47□□□□□ -0.57
HLA-C-206ENST00000470363 NPIPB15A6NHN6 443 aaPredicted RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 NVLO15381 856 aaKnown RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 BANF1O75531 89 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 PGLSO95336 258 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 SOD1P00441 154 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 KELP23276 732 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 VIPR1P32241 457 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 HSPA9P38646 679 aaKnown RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 ETV3P41162 512 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 INHBCP55103 352 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 DPTQ07507 201 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 MORF4L2Q15014 288 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 ACOX1Q15067 660 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 RALGPS1Q5JS13 557 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 HP1BP3Q5SSJ5 553 aaPredicted RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 KCTD11Q693B1 232 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 ALG1LQ6GMV1 187 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 KDELC1Q6UW63 502 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 ZNF574Q6ZN55 896 aaPredicted RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 Q6ZVL8 140 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 PCGF5Q86SE9 256 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 CCDC25Q86WR0 208 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 FBXO39Q8N4B4 442 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 DTD2Q96FN9 168 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 IMP4Q96G21 291 aaKnown RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 TMEM74Q96NL1 305 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 FICDQ9BVA6 458 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 POLR1EQ9GZS1 481 aaKnown RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 CYP4F12Q9HCS2 524 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 KCTD5Q9NXV2 234 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 LRIT1Q9P2V4 623 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 ATXN7L1Q9ULK2 861 aaPredicted RBP11.46□□□□□ -0.57
HLA-C-206ENST00000470363 PHTF1Q9UMS5 762 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 SLC17A4Q9Y2C5 497 aa11.46□□□□□ -0.57
HLA-C-206ENST00000470363 SETXQ7Z333 2677 aaKnown RBP11.46□□□□□ -0.58
HLA-C-206ENST00000470363 PIEZO2Q9H5I5 2752 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
HLA-C-206ENST00000470363 A0A0U1RQS6 177 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 PSMD11O00231 422 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 AVILO75366 819 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 AGTP01019 485 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 PRLP01236 227 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 PDHA1P08559 390 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 HGFP14210 728 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 TPSB2P20231 275 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 MCM3P25205 808 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 MAGEA6P43360 314 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 GEMP55040 296 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 WNT3AP56704 352 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 CDK3Q00526 305 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 PTSQ03393 145 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 SQSTM1Q13501 440 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 BRD3Q15059 726 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 TPSAB1Q15661 275 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 MSS51Q4VC12 460 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 FNBP1LQ5T0N5 605 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 FBXO38Q6PIJ6 1188 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 FOXR1Q6PIV2 292 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 RFLNAQ6ZTI6 216 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 ZNF534Q76KX8 674 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 TSPAN33Q86UF1 283 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 CAND1Q86VP6 1230 aaKnown RBP11.45□□□□□ -0.58
HLA-C-206ENST00000470363 NLRP8Q86W28 1048 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 HEATR4Q86WZ0 1026 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 DTX1Q86Y01 620 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 Q8N9G6 341 aaPredicted RBP11.45□□□□□ -0.58
HLA-C-206ENST00000470363 OR52K1Q8NGK4 314 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 AENQ8WTP8 325 aaKnown RBP11.45□□□□□ -0.58
HLA-C-206ENST00000470363 NUS1Q96E22 293 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 MRGPRX2Q96LB1 330 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 SMIM14Q96QK8 99 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 CCNL2Q96S94 520 aaPredicted RBP11.45□□□□□ -0.58
HLA-C-206ENST00000470363 FMO2Q99518 471 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 DPEP2Q9H4A9 486 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 TRNAU1APQ9NX07 287 aaKnown RBP11.45□□□□□ -0.58
HLA-C-206ENST00000470363 MTRF1LQ9UGC7 380 aaKnown RBP11.45□□□□□ -0.58
HLA-C-206ENST00000470363 SHOC2Q9UQ13 582 aa11.45□□□□□ -0.58
HLA-C-206ENST00000470363 COL6A6A6NMZ7 2263 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms