RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 SATB2Q9UPW6 733 aa13.54□□□□□ -0.24
LINC00173-201ENST00000470091 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
LINC00173-201ENST00000470091 GOLGA8KD6RF30 607 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 AP3B1O00203 1094 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 RASGRF2O14827 1237 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 YY2O15391 372 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 PIAS1O75925 651 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 C1QL1O75973 258 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 PIGNO95427 931 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 CELA2BP08218 269 aaPredicted RBP13.53□□□□□ -0.24
LINC00173-201ENST00000470091 GSTA2P09210 222 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 RBMS1P29558 406 aaKnown RBP13.53□□□□□ -0.24
LINC00173-201ENST00000470091 STX2P32856 288 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 PPARDQ03181 441 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 CDK18Q07002 472 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 SEPT6Q14141 434 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 POU6F1Q14863 301 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 CRYMQ14894 314 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 SLC1A5Q15758 541 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 BROXQ5VW32 411 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 TRMT10BQ6PF06 316 aaKnown RBP13.53□□□□□ -0.24
LINC00173-201ENST00000470091 SRLQ86TD4 932 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 HID1Q8IV36 788 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 SLC35F3Q8IY50 421 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 GSDMBQ8TAX9 411 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 KCNE4Q8WWG9 221 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 GLMNQ92990 594 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 TSACCQ96A04 125 aaPredicted RBP13.53□□□□□ -0.24
LINC00173-201ENST00000470091 ZNF669Q96BR6 464 aaPredicted RBP13.53□□□□□ -0.24
LINC00173-201ENST00000470091 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 TRIB3Q96RU7 358 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 C1QTNF7Q9BXJ2 289 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 IL22Q9GZX6 179 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 CLPBQ9H078 707 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 ACSS3Q9H6R3 686 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 NCKIPSDQ9NZQ3 722 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 SIRPGQ9P1W8 387 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 CTNNAL1Q9UBT7 734 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 SOX13Q9UN79 622 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 DOLKQ9UPQ8 538 aa13.53□□□□□ -0.24
LINC00173-201ENST00000470091 LOC285095A0A1B0GVY8 99 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 A0A1W2PNU3 283 aaPredicted RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 CCDC78A2IDD5 438 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 PMS2P1A4D2B8 440 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 LMO7DNF2Z398 122 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 TK2O00142 265 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 TPP1O14773 563 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 PRKCGP05129 697 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 CTSEP14091 401 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 HLA-DPA1P20036 260 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 CES1P23141 567 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 GCAP28676 217 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 RPIAP49247 311 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 AP1S1P61966 158 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 YPEL5P62699 121 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 TRAF2Q12933 501 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 KLHL38Q2WGJ6 581 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 TAF1BQ53T94 588 aaPredicted RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 SPANXN3Q5MJ09 141 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 RBM44Q6ZP01 1051 aaKnown RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 UNC5BQ8IZJ1 945 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 KRT222Q8N1A0 295 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 PPHLN1Q8NEY8 458 aaKnown RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 CCDC77Q9BR77 488 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 NAT9Q9BTE0 207 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 LRRC61Q9BV99 259 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 BOCQ9BWV1 1114 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 TDRD1Q9BXT4 1180 aaKnown RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.25
LINC00173-201ENST00000470091 ARNT2Q9HBZ2 717 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 ASCL3Q9NQ33 180 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 THSD1Q9NS62 852 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 OGFRQ9NZT2 677 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 PADI4Q9UM07 663 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 CHKBQ9Y259 395 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 TCAF1Q9Y4C2 921 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 ENTPD2Q9Y5L3 495 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 RPS6KL1Q9Y6S9 549 aa13.52□□□□□ -0.25
LINC00173-201ENST00000470091 KIF26BQ2KJY2 2108 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 TEX51A0A1B0GUA7 166 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 TCEA3O75764 348 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
LINC00173-201ENST00000470091 NDST3O95803 873 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 C1QAP02745 245 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 FGF1P05230 155 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 NMBRP28336 390 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 ERVPABLB-1P60509 514 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 NSUN2Q08J23 767 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00173-201ENST00000470091 INPP5AQ14642 412 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 LRRC14Q15048 493 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 IRF4Q15306 451 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 TMED2Q15363 201 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 SKIDA1Q1XH10 827 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 WSCD2Q2TBF2 565 aa13.51□□□□□ -0.25
LINC00173-201ENST00000470091 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms