RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 BPIP17213 487 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 CTPS1P17812 591 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 GPD1P21695 349 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 STC1P52823 247 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 PPP1CAP62136 330 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 SLC10A7Q0GE19 358 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 GPR18Q14330 331 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 ZNF630Q2M218 657 aaPredicted RBP11.77□□□□□ -0.53
LSM2-209ENST00000470083 ANO6Q4KMQ2 910 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 PLEKHS1Q5SXH7 462 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 ARMC12Q5T9G4 340 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 HGSNATQ68CP4 663 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 LCN10Q6JVE6 187 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 FAM198BQ6UWH4 519 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 BNC2Q6ZN30 1099 aaPredicted RBP11.77□□□□□ -0.53
LSM2-209ENST00000470083 RAB43Q86YS6 212 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 DSELQ8IZU8 1212 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 OR8K5Q8NH50 307 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 EPS8L1Q8TE68 723 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 GRHL3Q8TE85 626 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 PIH1D2Q8WWB5 315 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 RELTQ969Z4 430 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.53
LSM2-209ENST00000470083 ZNF599Q96NL3 588 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 MGME1Q9BQP7 344 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 C11orf70Q9BRQ4 267 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 CARD9Q9H257 536 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 ZNF552Q9H707 407 aaPredicted RBP11.77□□□□□ -0.53
LSM2-209ENST00000470083 SLC40A1Q9NP59 571 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 SIK3Q9Y2K2 1263 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 CCP110O43303 1012 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 CYP1A1P04798 512 aaPredicted RBP11.76□□□□□ -0.53
LSM2-209ENST00000470083 CAPN1P07384 714 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 CAPN3P20807 821 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 HTR1EP28566 365 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 SSTR2P30874 369 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 CA5AP35218 305 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 ARL4DP49703 201 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 GSCP56915 257 aaPredicted RBP11.76□□□□□ -0.53
LSM2-209ENST00000470083 HSD11B2P80365 405 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 RALGPS1Q5JS13 557 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 WDR59Q6PJI9 974 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 CERS6Q6ZMG9 384 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 MRGPREQ86SM8 312 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 CDH24Q86UP0 819 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 RAVER1Q8IY67 606 aaKnown RBP11.76□□□□□ -0.53
LSM2-209ENST00000470083 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 NDUFAF2Q8N183 169 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 PGBD5Q8N414 524 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 GALNT16Q8N428 558 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 D2HGDHQ8N465 521 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 NPWQ8N729 165 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 CLEC1AQ8NC01 280 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 FAR1Q8WVX9 515 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 HDAC11Q96DB2 347 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 FER1L6-AS2Q96M78 137 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 IP6K3Q96PC2 410 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 KCND1Q9NSA2 647 aa11.76□□□□□ -0.53
LSM2-209ENST00000470083 PDZK1P1A8MUH7 402 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 FADS2P1A8MWK0 482 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 MTA2O94776 668 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 BRAFP15056 766 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 RORAP35398 523 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 TSFMP43897 325 aaKnown RBP11.75□□□□□ -0.53
LSM2-209ENST00000470083 ZNF143P52747 638 aaPredicted RBP11.75□□□□□ -0.53
LSM2-209ENST00000470083 NCF4Q15080 339 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 VWA2Q5GFL6 755 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 DCAF10Q5QP82 559 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 HENMT1Q5T8I9 393 aaKnown RBP11.75□□□□□ -0.53
LSM2-209ENST00000470083 DPY19L2P1Q6NXN4 242 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 ABRAXAS1Q6UWZ7 409 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 TRIM72Q6ZMU5 477 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 CREBRFQ8IUR6 639 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 PARP9Q8IXQ6 854 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 MMP21Q8N119 569 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 SLC30A5Q8TAD4 765 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 CPT1BQ92523 772 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 SNX21Q969T3 373 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 ZNF501Q96CX3 271 aaPredicted RBP11.75□□□□□ -0.53
LSM2-209ENST00000470083 AGAP3Q96P47 875 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 TRAPPC9Q96Q05 1148 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 SMIM14Q96QK8 99 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 CD180Q99467 661 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 MAP3K3Q99759 626 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 SLX1AQ9BQ83 275 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 WDR77Q9BQA1 342 aaPredicted RBP11.75□□□□□ -0.53
LSM2-209ENST00000470083 SELENOOQ9BVL4 669 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 FAM207AQ9NSI2 230 aaPredicted RBP11.75□□□□□ -0.53
LSM2-209ENST00000470083 ATXN10Q9UBB4 475 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 DNPEPQ9ULA0 475 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
LSM2-209ENST00000470083 FHOD1Q9Y613 1164 aa11.75□□□□□ -0.53
LSM2-209ENST00000470083 A0A0J9YYE9 177 aa11.74□□□□□ -0.53
LSM2-209ENST00000470083 A0A1W2PQJ5 194 aa11.74□□□□□ -0.53
LSM2-209ENST00000470083 TLCD2A6NGC4 264 aa11.74□□□□□ -0.53
LSM2-209ENST00000470083 OR52A4PA6NMU1 304 aa11.74□□□□□ -0.53
LSM2-209ENST00000470083 EIF3CLB5ME19 914 aaKnown RBP11.74□□□□□ -0.53
LSM2-209ENST00000470083 GPR89AB7ZAQ6 455 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms