RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 BPIFB1Q8TDL5 484 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 ISOC1Q96CN7 298 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 HGH1Q9BTY7 390 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 NPLQ9BXD5 320 aaPredicted RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 TRIM8Q9BZR9 551 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 RPF2Q9H7B2 306 aaKnown RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 NANOGQ9H9S0 305 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 PREBQ9HCU5 417 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 SMPD3Q9NY59 655 aaPredicted RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 ACTL7AQ9Y615 435 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 H7C0S8 307 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 ARNTLO00327 626 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 BTN3A1O00481 513 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 ENPP3O14638 875 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 KDELR3O43731 214 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 TPST1O60507 370 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 PRSS23O95084 383 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 F11P03951 625 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 VARSP26640 1264 aaKnown RBP13.52□□□□□ -0.25
BRCA1-209ENST00000470026 SLC6A4P31645 630 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 OR1G1P47890 313 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 ESRRGP62508 458 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 KCNA10Q16322 511 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 MFSD14CQ5VZR4 134 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 IL31Q6EBC2 164 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 TRAF7Q6Q0C0 670 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 Q6ZSR9 355 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 GPRIN3Q6ZVF9 776 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 PIANPQ8IYJ0 282 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 OR7D4Q8NG98 312 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 CRISPLD1Q9H336 500 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 LIN28AQ9H9Z2 209 aaKnown RBP13.52□□□□□ -0.25
BRCA1-209ENST00000470026 RIC8BQ9NVN3 520 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
BRCA1-209ENST00000470026 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.25
BRCA1-209ENST00000470026 A0A0J9YVX5 310 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 MTMR11A4FU01 709 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 C2orf81A6NN90 581 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 ACSL4O60488 711 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 TLR5O60602 858 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 VPS26AO75436 327 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 LPOP22079 712 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CES1P23141 567 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CST5P28325 142 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 TTKP33981 857 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 RPS9P46781 194 aaKnown RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CDH4P55283 916 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 NUP107P57740 925 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CRY1Q16526 586 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 FBXO48Q5FWF7 155 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 ABRAXAS1Q6UWZ7 409 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 HID1Q8IV36 788 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 DHRSXQ8N5I4 330 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 LEMD2Q8NC56 503 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 ZNF420Q8TAQ5 688 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 OSCP1Q8WVF1 389 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 KCNJ9Q92806 393 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 ZBED2Q9BTP6 218 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CINPQ9BW66 212 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 LRRC3Q9BY71 257 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CCSER2Q9H7U1 834 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 INTS7Q9NVH2 962 aaKnown RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 SLAMF8Q9P0V8 285 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 ZNHIT2Q9UHR6 403 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 ASB1Q9Y576 335 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 PCDHB3Q9Y5E6 796 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 COMMD10Q9Y6G5 202 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CROCCQ5TZA2 2017 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 H0YAE9 185 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CLOCKO15516 846 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 TBC1D4O60343 1298 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 LDLRP01130 860 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 TTPAP49638 278 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 KCNQ1P51787 676 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 GPR17Q13304 367 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 PSAPL1Q6NUJ1 521 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 LYSMD3Q7Z3D4 306 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CFAP52Q8N1V2 620 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 CHCHD4Q8N4Q1 142 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 BIRC7Q96CA5 298 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 PDLIM5Q96HC4 596 aaKnown RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 TMEM74Q96NL1 305 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 HIPK3Q9H422 1215 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 TRMT13Q9NUP7 481 aaKnown RBP13.51□□□□□ -0.25
BRCA1-209ENST00000470026 GALNT8Q9NY28 637 aa13.51□□□□□ -0.25
BRCA1-209ENST00000470026 H0Y858 1186 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 UPK1AO00322 258 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 ANKRD28O15084 1053 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 NIPSNAP2O75323 286 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 NCK1P16333 377 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 DCKP27707 260 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms