RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CPTPQ5TA50 214 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 FSTL4Q6MZW2 842 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 GPR32O75388 356 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 C4BPBP20851 252 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 TTC23Q5W5X9 447 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 B3GNT6Q6ZMB0 384 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ZNF783Q6ZMS7 281 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 GDPD5Q8WTR4 605 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 C1orf74Q96LT6 269 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 IPPKQ9H8X2 491 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 MKL2Q9ULH7 1088 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ZNF490Q9ULM2 529 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-213ENST00000469300 PLIN3O60664 434 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 TNFAIP8O95379 198 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 RB1P06400 928 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 GNSP15586 552 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ITPKAP23677 461 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 RABGGTBP53611 331 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 UBE3AQ05086 875 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 GALNT2Q10471 571 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 BIKQ13323 160 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 UBXN2BQ14CS0 331 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 EOGTQ5NDL2 527 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 RSBN1Q5VWQ0 802 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-213ENST00000469300 SLC9A4Q6AI14 798 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 MED27Q6P2C8 311 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 SCIMPQ6UWF3 145 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 GCNT7Q6ZNI0 430 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 TSTD1Q8NFU3 115 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 BORCS6Q96GS4 357 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 RNPEPL1Q9HAU8 725 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ATXN10Q9UBB4 475 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 CACNG4Q9UBN1 327 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 OR2AG2A6NM03 316 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 LCN9Q8WX39 176 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ZNF184Q99676 751 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ZSCAN5AQ9BUG6 496 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 NUSAP1Q9BXS6 441 aaKnown RBP14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ROGDIQ9GZN7 287 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 IL36AQ9UHA7 158 aa14.94□□□□□ -0.02
LIMS2-213ENST00000469300 GPN3Q9UHW5 284 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-213ENST00000469300 ATP6AP2A0A1C7CYW4 349 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 ATP6AP2O75787 350 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 UROSP10746 265 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 UMPSP11172 480 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 LRRC74BQ6ZQY2 392 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 ZCCHC7Q8N3Z6 543 aaKnown RBP14.93□□□□□ -0.02
LIMS2-213ENST00000469300 SIPA1Q96FS4 1042 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 SLCO1B3Q9NPD5 702 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 PCDHGA11Q9Y5H2 935 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 HIST1H2ABP04908 130 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 TCF3P15923 654 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 KIR3DL1P43629 444 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 SLC39A5Q6ZMH5 540 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 HFE2Q6ZVN8 426 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 HIST3H2AQ7L7L0 130 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 AMZ2Q86W34 360 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 SAMD14Q8IZD0 417 aaPredicted RBP14.93□□□□□ -0.02
LIMS2-213ENST00000469300 HIST1H2ACQ93077 130 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 C19orf60Q96EN9 201 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 TMEM248Q9NWD8 314 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
LIMS2-213ENST00000469300 SLC31A1O15431 190 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 CNMDO75829 334 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 BCL10O95999 233 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 KCNQ1P51787 676 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 CLCQ05315 142 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 UBXN11Q5T124 520 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 RINLQ6ZS11 566 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 ULK2Q8IYT8 1036 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 DNAJB14Q8TBM8 379 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 ZDHHC3Q9NYG2 299 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 GRHL1Q9NZI5 618 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 CNTN6Q9UQ52 1028 aa14.93□□□□□ -0.02
LIMS2-213ENST00000469300 NRP2O60462 931 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 METTL18O95568 372 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 EPOP01588 193 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 HLA-DQB2P05538 268 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 BUD31P41223 144 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-213ENST00000469300 MANFP55145 182 aaKnown RBP14.92□□□□□ -0.02
LIMS2-213ENST00000469300 MS4A13Q5J8X5 152 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 ERICH5Q6P6B1 374 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 ZC3H7AQ8IWR0 971 aaKnown RBP14.92□□□□□ -0.02
LIMS2-213ENST00000469300 SMG8Q8ND04 991 aaKnown RBP14.92□□□□□ -0.02
LIMS2-213ENST00000469300 AGAP11Q8TF27 550 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 VMP1Q96GC9 406 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 ITM2CQ9NQX7 267 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 POLR3BQ9NW08 1133 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-213ENST00000469300 CCDC88AQ3V6T2 1871 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 NUP98P52948 1817 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 ABLIM1O14639 778 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 LIN7AO14910 233 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-213ENST00000469300 NPHS1O60500 1241 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 MFN2O95140 757 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 TRBC1P01850 177 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 CSF2RAP15509 400 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 GJA8P48165 433 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 NRIP1P48552 1158 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 SEC13P55735 322 aa14.92□□□□□ -0.02
LIMS2-213ENST00000469300 SLC25A11Q02978 314 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms