RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CLCNKAP51800 687 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 PPIDQ08752 370 aaKnown RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 AP1B1Q10567 949 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 PTPN13Q12923 2485 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 NOMO1Q15155 1222 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 ZNF569Q5MCW4 686 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 FAM199XQ6PEV8 388 aaPredicted RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 C6orf15Q6UXA7 325 aaPredicted RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 CERS6Q6ZMG9 384 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 RASGRP3Q8IV61 690 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 MAP7D3Q8IWC1 876 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 TRIM48Q8IWZ4 208 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 RAVER1Q8IY67 606 aaKnown RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 ESX1Q8N693 406 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 SYN2Q92777 582 aaPredicted RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 GLYATL1Q969I3 302 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 EFHD1Q9BUP0 239 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 GPR63Q9BZJ6 419 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 TRIT1Q9H3H1 467 aaKnown RBP12.07□□□□□ -0.48
HDAC3-204ENST00000469207 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 ANAPC2Q9UJX6 822 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 CAPN11Q9UMQ6 739 aa12.07□□□□□ -0.48
HDAC3-204ENST00000469207 CDC14CA4D256 554 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 SPAG6O75602 509 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 DNAJB5O75953 348 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 CDK14O94921 469 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 NDUFA10O95299 355 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 PDGFAP04085 211 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 GYPCP04921 128 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 ANKRD34CP0C6C1 535 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 SLC2A4P14672 509 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 MX2P20592 715 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 CASP14P31944 242 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 MAN1A1P33908 653 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 UBASH3AP57075 661 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 IFI35P80217 286 aaPredicted RBP12.06□□□□□ -0.48
HDAC3-204ENST00000469207 ZBED6P86452 979 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 GPR18Q14330 331 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 MESDQ14696 234 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 KCNAB1Q14722 419 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 LLGL1Q15334 1064 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 ATP13A5Q4VNC0 1218 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 LACTB2Q53H82 288 aaPredicted RBP12.06□□□□□ -0.48
HDAC3-204ENST00000469207 CACHD1Q5VU97 1274 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 HIST2H2BCQ6DN03 193 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 IRGCQ6NXR0 463 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 C11orf96Q7Z7L8 435 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 NT5DC3Q86UY8 548 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 LRRTM4Q86VH4 590 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 TRAM1L1Q8N609 369 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 NAT14Q8WUY8 206 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 IMP4Q96G21 291 aaKnown RBP12.06□□□□□ -0.48
HDAC3-204ENST00000469207 ZSCAN5AQ9BUG6 496 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 ADGRE3Q9BY15 652 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 SLC40A1Q9NP59 571 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 MAN2B2Q9Y2E5 1009 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 LUC7L2Q9Y383 392 aaKnown RBP12.06□□□□□ -0.48
HDAC3-204ENST00000469207 ZNF711Q9Y462 761 aa12.06□□□□□ -0.48
HDAC3-204ENST00000469207 IGHV5-51A0A0C4DH38 117 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 LRRD1A4D1F6 860 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 CLEC18AA5D8T8 446 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 C3orf70A6NLC5 250 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 F5H423 210 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 KMOO15229 486 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 GPR39O43194 453 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UGT1A9O60656 530 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 PMPCBO75439 489 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 KRT7P08729 469 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 TNNT1P13805 278 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 FOLR1P15328 257 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UGT1A6P19224 532 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UGT1A1P22309 533 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UGT1A4P22310 534 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 ANP32AP39687 249 aaKnown RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 NOP2P46087 812 aaKnown RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 DYNLT1P63172 113 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 MC1RQ01726 317 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 CDK18Q07002 472 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 TMEM115Q12893 351 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 MAP7Q14244 749 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 ABRAXAS1Q6UWZ7 409 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 CLEC18BQ6UXF7 455 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 CLEC18CQ8NCF0 446 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 TADA1Q96BN2 335 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 STAMBPL1Q96FJ0 436 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 TRIM55Q9BYV6 548 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 EPB41L1Q9H4G0 881 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 ZNF768Q9H5H4 540 aaKnown RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UCK1Q9HA47 277 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UGT1A7Q9HAW7 530 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UGT1A10Q9HAW8 530 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 UGT1A8Q9HAW9 530 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 MAGEE1Q9HCI5 957 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 SAE1Q9UBE0 346 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-204ENST00000469207 LNPEPQ9UIQ6 1025 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 TLK1Q9UKI8 766 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 PSMD13Q9UNM6 376 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
HDAC3-204ENST00000469207 PIPSLA2A3N6 862 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms