RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ATP13A5Q4VNC0 1218 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 SETMARQ53H47 684 aaPredicted RBP5.01□□□□□ -1.61
LSM5-209ENST00000468872 KCNT1Q5JUK3 1230 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 ARMC3Q5W041 872 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 C18orf65Q6ZTR6 163 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 CEP97Q8IW35 865 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 ZBTB8BQ8NAP8 495 aaPredicted RBP5.01□□□□□ -1.61
LSM5-209ENST00000468872 TDRD5Q8NAT2 981 aaKnown RBP5.01□□□□□ -1.61
LSM5-209ENST00000468872 ACVR1CQ8NER5 493 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 SMC6Q96SB8 1091 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 CDRT15Q96T59 188 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 PCYT2Q99447 389 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 GFI1Q99684 422 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 CMKLR1Q99788 373 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 TMEM39BQ9GZU3 492 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 DENND2DQ9H6A0 471 aaPredicted RBP5.01□□□□□ -1.61
LSM5-209ENST00000468872 TRMT1Q9NXH9 659 aaKnown RBP5.01□□□□□ -1.61
LSM5-209ENST00000468872 C1RLQ9NZP8 487 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 SELENONQ9NZV5 590 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 C5AR2Q9P296 337 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 HACL1Q9UJ83 578 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 ANAPC2Q9UJX6 822 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 TMEM184BQ9Y519 407 aaPredicted RBP5.01□□□□□ -1.61
LSM5-209ENST00000468872 PCDHGA5Q9Y5G8 931 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 SNX9Q9Y5X1 595 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 IGLV5-52A0A0A0MRZ9 124 aa5□□□□□ -1.61
LSM5-209ENST00000468872 EME2A4GXA9 379 aaPredicted RBP5□□□□□ -1.61
LSM5-209ENST00000468872 GOLGA6L9A6NEM1 432 aa5□□□□□ -1.61
LSM5-209ENST00000468872 KCNN4O15554 427 aa5□□□□□ -1.61
LSM5-209ENST00000468872 TBX10O75333 385 aa5□□□□□ -1.61
LSM5-209ENST00000468872 ZNF217O75362 1048 aa5□□□□□ -1.61
LSM5-209ENST00000468872 BCL10O95999 233 aa5□□□□□ -1.61
LSM5-209ENST00000468872 APOA4P06727 396 aa5□□□□□ -1.61
LSM5-209ENST00000468872 IGHV4-30-4P0DP06 118 aa5□□□□□ -1.61
LSM5-209ENST00000468872 HRH2P25021 359 aa5□□□□□ -1.61
LSM5-209ENST00000468872 CAPZA2P47755 286 aa5□□□□□ -1.61
LSM5-209ENST00000468872 CLDN20P56880 219 aa5□□□□□ -1.61
LSM5-209ENST00000468872 BRWD1-AS2P59051 145 aa5□□□□□ -1.61
LSM5-209ENST00000468872 CRYZQ08257 329 aaKnown RBP5□□□□□ -1.61
LSM5-209ENST00000468872 DDR1Q08345 913 aa5□□□□□ -1.61
LSM5-209ENST00000468872 DSC1Q08554 894 aa5□□□□□ -1.61
LSM5-209ENST00000468872 SNTB1Q13884 538 aaKnown RBP5□□□□□ -1.61
LSM5-209ENST00000468872 IL11RAQ14626 422 aa5□□□□□ -1.61
LSM5-209ENST00000468872 MVPQ14764 893 aaKnown RBP5□□□□□ -1.61
LSM5-209ENST00000468872 OASLQ15646 514 aaKnown RBP5□□□□□ -1.61
LSM5-209ENST00000468872 C9orf152Q5JTZ5 239 aa5□□□□□ -1.61
LSM5-209ENST00000468872 EFHC1Q5JVL4 640 aa5□□□□□ -1.61
LSM5-209ENST00000468872 C18orf63Q68DL7 685 aa5□□□□□ -1.61
LSM5-209ENST00000468872 RGMBQ6NW40 437 aa5□□□□□ -1.61
LSM5-209ENST00000468872 BRAT1Q6PJG6 821 aa5□□□□□ -1.61
LSM5-209ENST00000468872 LDB1Q86U70 411 aaPredicted RBP5□□□□□ -1.61
LSM5-209ENST00000468872 ADIPOR2Q86V24 386 aa5□□□□□ -1.61
LSM5-209ENST00000468872 FJX1Q86VR8 437 aa5□□□□□ -1.61
LSM5-209ENST00000468872 PGBD5Q8N414 524 aa5□□□□□ -1.61
LSM5-209ENST00000468872 IQCF1Q8N6M8 205 aa5□□□□□ -1.61
LSM5-209ENST00000468872 SLC38A9Q8NBW4 561 aa5□□□□□ -1.61
LSM5-209ENST00000468872 MCUQ8NE86 351 aa5□□□□□ -1.61
LSM5-209ENST00000468872 LPGAT1Q92604 370 aa5□□□□□ -1.61
LSM5-209ENST00000468872 MEIS3Q99687 375 aa5□□□□□ -1.61
LSM5-209ENST00000468872 HGH1Q9BTY7 390 aa5□□□□□ -1.61
LSM5-209ENST00000468872 CCDC106Q9BWC9 280 aa5□□□□□ -1.61
LSM5-209ENST00000468872 SPATC1LQ9H0A9 340 aa5□□□□□ -1.61
LSM5-209ENST00000468872 RAD21L1Q9H4I0 556 aa5□□□□□ -1.61
LSM5-209ENST00000468872 RABEP2Q9H5N1 569 aa5□□□□□ -1.61
LSM5-209ENST00000468872 TAS2R14Q9NYV8 317 aa5□□□□□ -1.61
LSM5-209ENST00000468872 GDE1Q9NZC3 331 aa5□□□□□ -1.61
LSM5-209ENST00000468872 LARSQ9P2J5 1176 aaKnown RBP5□□□□□ -1.61
LSM5-209ENST00000468872 CRNNQ9UBG3 495 aaPredicted RBP5□□□□□ -1.61
LSM5-209ENST00000468872 TSPYL4Q9UJ04 414 aa5□□□□□ -1.61
LSM5-209ENST00000468872 B3GALT5Q9Y2C3 310 aa5□□□□□ -1.61
LSM5-209ENST00000468872 LOXL2Q9Y4K0 774 aa5□□□□□ -1.61
LSM5-209ENST00000468872 MED1Q15648 1581 aaPredicted RBP4.99□□□□□ -1.61
LSM5-209ENST00000468872 KIF21AQ7Z4S6 1674 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 CLEC18AA5D8T8 446 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 TSPY2A6NKD2 308 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 MAGEB17A8MXT2 336 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 HS3ST1O14792 307 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 ANKRD28O15084 1053 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 KCNJ13O60928 360 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 CREG1O75629 220 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 GAGE7O76087 117 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 ZWINTO95229 277 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 HOXC6P09630 235 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 GAGE12FP0CL80 117 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 GAGE12GP0CL81 117 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 GAGE12IP0CL82 117 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 TSPY3P0CV98 308 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 TSPY8P0CW00 308 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 SRCP12931 536 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 ARSEP51690 589 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 TSPY1Q01534 308 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 GAGE1Q13065 139 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 GAGE4Q13068 117 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 ASIC2Q16515 512 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 SYT16Q17RD7 645 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 FAM98BQ52LJ0 330 aaKnown RBP4.99□□□□□ -1.61
LSM5-209ENST00000468872 KRTCAP3Q53RY4 240 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 XKR9Q5GH70 373 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 TPRG1Q6ZUI0 275 aa4.99□□□□□ -1.61
LSM5-209ENST00000468872 HAUS6Q7Z4H7 955 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms