RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ARRB2P32121 409 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 SATB1Q01826 763 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 CNTN1Q12860 1018 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 RCN2Q14257 317 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 OR4D1Q15615 310 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 CST6Q15828 149 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 C2orf27AQ580R0 203 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 TRIM67Q6ZTA4 783 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 PIWIL2Q8TC59 973 aaKnown RBP18.76■□□□□ 0.59
SMC4-209ENST00000468653 LKAAEAR1Q8TD35 194 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 PHF21BQ96EK2 531 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 COQ10AQ96MF6 247 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 PANX3Q96QZ0 392 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 TMEM120AQ9BXJ8 343 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 DRC3Q9H069 523 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 ACSS2Q9NR19 701 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 NCKIPSDQ9NZQ3 722 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 COQ6Q9Y2Z9 468 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 CFAP99D6REC4 459 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 BTN3A1O00481 513 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 LZTS3O60299 673 aaPredicted RBP18.75■□□□□ 0.59
SMC4-209ENST00000468653 TSPAN12O95859 305 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 EGFP01133 1207 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 OR56A5P0C7T3 313 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 NTSR1P30989 418 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 RGS4P49798 205 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 B4GALNT1Q00973 533 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 TMEM52BQ4KMG9 183 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 PIWIL4Q7Z3Z4 852 aaKnown RBP18.75■□□□□ 0.59
SMC4-209ENST00000468653 CACUL1Q86Y37 369 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 RAVER1Q8IY67 606 aaKnown RBP18.75■□□□□ 0.59
SMC4-209ENST00000468653 DNASE1L2Q92874 299 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 MOCOSQ96EN8 888 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 DTD2Q96FN9 168 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 PHF7Q9BWX1 381 aaPredicted RBP18.75■□□□□ 0.59
SMC4-209ENST00000468653 KCNK13Q9HB14 408 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 SPATS2LQ9NUQ6 558 aaKnown RBP18.75■□□□□ 0.59
SMC4-209ENST00000468653 ABCF3Q9NUQ8 709 aa18.75■□□□□ 0.59
SMC4-209ENST00000468653 NPEPPSL1A6NEC2 478 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 FADS2P1A8MWK0 482 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 CDC7O00311 574 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 HGSO14964 777 aaPredicted RBP18.74■□□□□ 0.59
SMC4-209ENST00000468653 MID1O15344 667 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 MMP20O60882 483 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 KERAO60938 352 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 RECQL5O94762 991 aaPredicted RBP18.74■□□□□ 0.59
SMC4-209ENST00000468653 ADH1BP00325 375 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 C6P13671 934 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 ATP1B2P14415 290 aaPredicted RBP18.74■□□□□ 0.59
SMC4-209ENST00000468653 GM2AP17900 193 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 GRSF1Q12849 480 aaKnown RBP eCLIP18.74■□□□□ 0.592e-14■■■■■ 48.8
SMC4-209ENST00000468653 STARD3Q14849 445 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 TSNQ15631 228 aaKnown RBP18.74■□□□□ 0.59
SMC4-209ENST00000468653 ATG14Q6ZNE5 492 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 DET1Q7L5Y6 550 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 CYP2U1Q7Z449 544 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 ZBTB2Q8N680 514 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 CXorf40AQ8TE69 158 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 PPM1EQ8WY54 764 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 CCT6BQ92526 530 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 ATOH8Q96SQ7 321 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 ILKAPQ9H0C8 392 aaPredicted RBP18.74■□□□□ 0.59
SMC4-209ENST00000468653 PNPOQ9NVS9 261 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 KCNK4Q9NYG8 393 aa18.74■□□□□ 0.59
SMC4-209ENST00000468653 SYCE1LA8MT33 242 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 SUPT3HB4E1H0 165 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 UBXN8O00124 270 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 NPHS1O60500 1241 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 MAGEC1O60732 1142 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 SUPT3HO75486 399 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 DCTN3O75935 186 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 MSH3P20585 1137 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 C5AR1P21730 350 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 DGKAP23743 735 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 AQP5P55064 265 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 SETDB1Q15047 1291 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 ARL13AQ5H913 290 aaPredicted RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 TMEM196Q5HYL7 178 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 RAB44Q7Z6P3 723 aaPredicted RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 YTHDF3Q7Z739 585 aaKnown RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 KCNV2Q8TDN2 545 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 BTN2A2Q8WVV5 523 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 NUS1Q96E22 293 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 PDLIM5Q96HC4 596 aaKnown RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 TMEM237Q96Q45 408 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 SIKE1Q9BRV8 207 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 IKZF3Q9UKT9 509 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 FADS3Q9Y5Q0 445 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 CCDC189A1A4V9 331 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 MTX2O75431 263 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 CHRNGP07510 517 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 GFAPP14136 432 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 DRD1P21728 446 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 DRD3P35462 400 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 SERPINB5P36952 375 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 NFKB2Q00653 900 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 MLLT1Q03111 559 aaPredicted RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 TTLL9Q3SXZ7 439 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 LDLRAP1Q5SW96 308 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 PIP5KL1Q5T9C9 394 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms