RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OASLQ15646 514 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 TBR1Q16650 682 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 RNF151Q2KHN1 245 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 P3H1Q32P28 736 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PLEKHG6Q3KR16 790 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 LEXMQ3ZCV2 418 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PARP15Q460N3 678 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 GLE1Q53GS7 698 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 TEX44Q53QW1 395 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 MARC1Q5VT66 337 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 IZUMO3Q5VZ72 239 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 AFMIDQ63HM1 303 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 NAIF1Q69YI7 327 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 CXorf57Q6NSI4 855 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PGM2L1Q6PCE3 622 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 DRICH1Q6PGQ1 229 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 CLEC14AQ86T13 490 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 SETD3Q86TU7 594 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 FAM217AQ8IXS0 508 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 IFT20Q8IY31 132 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 GSPT2Q8IYD1 628 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF567Q8N184 647 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 UMODL1-AS1Q8N2C9 162 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 BBS5Q8N3I7 341 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC44A3Q8N4M1 653 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 CPA6Q8N4T0 437 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PAF1Q8N7H5 531 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ATP11CQ8NB49 1132 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 FIBINQ8TAL6 211 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 TSPEARQ8WU66 669 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 SORCS1Q8WY21 1168 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 GCDHQ92947 438 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ATP2A3Q93084 1043 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ZBTB9Q96C00 473 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 LRRC45Q96CN5 670 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 OTUB2Q96DC9 234 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 RPL10LQ96L21 214 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 GDAP1L1Q96MZ0 367 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 OLFM3Q96PB7 478 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 QKIQ96PU8 341 aaKnown RBP eCLIP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PNKPQ96T60 521 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ERP44Q9BS26 406 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 FEM1AQ9BSK4 669 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 CINPQ9BW66 212 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PARD6BQ9BYG5 372 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC13A1Q9BZW2 595 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 CIPCQ9C0C6 399 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 BRD8Q9H0E9 1235 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 RAB17Q9H0T7 212 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 MAGEH1Q9H213 219 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ANKZF1Q9H8Y5 726 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 TRPV4Q9HBA0 871 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 MSL2Q9HCI7 577 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ZDHHC4Q9NPG8 344 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 OBP2AQ9NY56 170 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PAK5Q9P286 719 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 DEC1Q9P2X7 70 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 EPS15L1Q9UBC2 864 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 UBA2Q9UBT2 640 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 PCYOX1Q9UHG3 505 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 RSPH14Q9UHP6 348 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 ANAPC5Q9UJX4 755 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 GGA2Q9UJY4 613 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 TBC1D30Q9Y2I9 924 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 GPR45Q9Y5Y3 372 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 RAD54BQ9Y620 910 aa4.12□□□□□ -1.75
TMEM39A-204ENST00000468545 TNRC18O15417 2968 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 C2orf16Q68DN1 1984 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 TCRBV7S3A2A0A539 114 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ANTXRLA6NF34 631 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 C5orf60A6NFR6 353 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ANHXE9PGG2 379 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 DNALI1O14645 258 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 MTSS1O43312 755 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 LAMTOR5O43504 91 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SMAD6O43541 496 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PRAMEF11O60813 436 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 TULP3O75386 442 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PMPCBO75439 489 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 GCATO75600 419 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 GJB3O75712 270 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 METTL18O95568 372 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 LY86O95711 162 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PENKP01210 267 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 APODP05090 189 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 HLA-DQB2P05538 268 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 INHBBP09529 407 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 CISD3P0C7P0 127 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 GAAP10253 952 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 AGXTP21549 392 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PSMB4P28070 264 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 HLA-FP30511 346 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 CNR2P34972 360 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 NNMTP40261 264 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 CD86P42081 329 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 WASP42768 502 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 MMP13P45452 471 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 RPL21P46778 160 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 STK19P49842 368 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 RENBPP51606 427 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms