RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ATP13A3Q9H7F0 1226 aa11.42□□□□□ -0.58
VPS26A-204ENST00000467852 MAGEF1Q9HAY2 307 aa11.42□□□□□ -0.58
VPS26A-204ENST00000467852 STAP1Q9ULZ2 295 aa11.42□□□□□ -0.58
VPS26A-204ENST00000467852 COQ4Q9Y3A0 265 aa11.42□□□□□ -0.58
VPS26A-204ENST00000467852 NUP210LQ5VU65 1888 aa11.42□□□□□ -0.58
VPS26A-204ENST00000467852 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 MED7O43513 233 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
VPS26A-204ENST00000467852 CUTAO60888 179 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 GADD45BO75293 160 aaPredicted RBP11.41□□□□□ -0.58
VPS26A-204ENST00000467852 PMPCBO75439 489 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 DAB1O75553 588 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 AGXTP21549 392 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 RORAP35398 523 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 ETV3P41162 512 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 FOLR3P41439 243 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 SULT1E1P49888 294 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 MCCD1P59942 119 aaPredicted RBP11.41□□□□□ -0.58
VPS26A-204ENST00000467852 GPR19Q15760 415 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 TMTC4Q5T4D3 741 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 ARTNQ5T4W7 220 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 RWDD4Q6NW29 188 aaKnown RBP11.41□□□□□ -0.58
VPS26A-204ENST00000467852 CERS6Q6ZMG9 384 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 DMRTC2Q8IXT2 367 aaPredicted RBP11.41□□□□□ -0.58
VPS26A-204ENST00000467852 SHC3Q92529 594 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 ZNF501Q96CX3 271 aaPredicted RBP11.41□□□□□ -0.58
VPS26A-204ENST00000467852 MBD6Q96DN6 1003 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 DTD2Q96FN9 168 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 MAGED4Q96JG8 741 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 NPY6RQ99463 290 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 DPH2Q9BQC3 489 aaPredicted RBP11.41□□□□□ -0.58
VPS26A-204ENST00000467852 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 EXOC1Q9NV70 894 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 COQ3Q9NZJ6 369 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 ABI3Q9P2A4 366 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 LHX3Q9UBR4 397 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 PCDHGC3Q9UN70 934 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 PRKAB1Q9Y478 270 aa11.41□□□□□ -0.58
VPS26A-204ENST00000467852 CUBNO60494 3623 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 CHD3Q12873 2000 aaKnown RBP11.4□□□□□ -0.58
VPS26A-204ENST00000467852 KLF7O75840 302 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-204ENST00000467852 CD63P08962 238 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 ACP5P13686 325 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 UGT1A4P22310 534 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 MST1P26927 711 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 PDCLQ13371 301 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 CUL4BQ13620 913 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 CYTH1Q15438 398 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 MEA1Q16626 185 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 CBWD6Q4V339 395 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 CBWD3Q5JTY5 395 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 CBWD5Q5RIA9 395 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 PRAMEF17Q5VTA0 474 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 OTUD1Q5VV17 481 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-204ENST00000467852 TCERG1LQ5VWI1 586 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 PRAMEF13Q5VWM6 474 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 ADAMTSL4Q6UY14 1074 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 C11orf57Q6ZUT1 292 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-204ENST00000467852 TRIM74Q86UV6 250 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 PHYKPLQ8IUZ5 450 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 D2HGDHQ8N465 521 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 TTC30BQ8N4P2 665 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 PGAP3Q96FM1 320 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-204ENST00000467852 C17orf62Q9BQA9 187 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 FANCEQ9HB96 536 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 PCMTD2Q9NV79 361 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 TMEM248Q9NWD8 314 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 B4GALT6Q9UBX8 382 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 GPN3Q9UHW5 284 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-204ENST00000467852 PTRH2Q9Y3E5 179 aaKnown RBP11.4□□□□□ -0.58
VPS26A-204ENST00000467852 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
VPS26A-204ENST00000467852 UBA6A0AVT1 1052 aaPredicted RBP11.39□□□□□ -0.59
VPS26A-204ENST00000467852 AGPSO00116 658 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 SLCO2B1O94956 709 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 RHOQP17081 205 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 TFE3P19532 575 aaPredicted RBP11.39□□□□□ -0.59
VPS26A-204ENST00000467852 ARG2P78540 354 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 DPTQ07507 201 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 BCL2L1Q07817 233 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 ADCY2Q08462 1091 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 CNGA3Q16281 694 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 QPCTQ16769 361 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 PTCHD3Q3KNS1 767 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 MLIPQ5VWP3 458 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 ISLR2Q6UXK2 745 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 LINC00696Q6ZRV3 163 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 PHLDB2Q86SQ0 1253 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 SRLQ86TD4 932 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 NLRP14Q86W24 1093 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 PPM1KQ8N3J5 372 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 TEKT4Q8WW24 435 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 ECHDC3Q96DC8 303 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 LMF1Q96S06 567 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 MAP3K3Q99759 626 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 ACTR5Q9H9F9 607 aaPredicted RBP11.39□□□□□ -0.59
VPS26A-204ENST00000467852 ZNF358Q9NW07 568 aa11.39□□□□□ -0.59
VPS26A-204ENST00000467852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS26A-204ENST00000467852 TRAV17A0A0B4J275 112 aa11.38□□□□□ -0.59
VPS26A-204ENST00000467852 HTRA2O43464 458 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-204ENST00000467852 PRAMEF2O60811 474 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms