RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MAGEE2Q8TD90 523 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 RETREG1Q9H6L5 497 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 SGK2Q9HBY8 427 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 IMP3Q9NV31 184 aaKnown RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 RPS6KB2Q9UBS0 482 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 URADA6NGE7 173 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 ZW10O43264 779 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 LRATO95237 230 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 PAPSS2O95340 614 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 FGFR3P22607 806 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 POLR2JP52435 117 aaKnown RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 IL23RQ5VWK5 629 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 CHSY3Q70JA7 882 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 IGDCC3Q8IVU1 814 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 RGL4Q8IZJ4 473 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 PRKAG3Q9UGI9 489 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 EGFL7Q9UHF1 273 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 TTC24A2A3L6 582 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 OCM2P0CE71 109 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 OCMP0CE72 109 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 ALFQ53S48 1182 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 MBLAC2Q68D91 279 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 HPS6Q86YV9 775 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 ABCA3Q99758 1704 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 EIF2B4Q9UI10 523 aaKnown RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 MAGEL2Q9UJ55 1249 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 PSMD13Q9UNM6 376 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 OR4F21O95013 312 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 CAPN1P07384 714 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 AMD1P17707 334 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 IMPDH1P20839 514 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 KIR3DL1P43629 444 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 PRKAG1P54619 331 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 OLIG2Q13516 323 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 CCDC142Q17RM4 750 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 FGD3Q5JSP0 725 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 TRIM40Q6P9F5 258 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 CFAP206Q8IYR0 622 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 OR2T12Q8NG77 320 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 SLC22A17Q8WUG5 538 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 USP7Q93009 1102 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 SLC2A6Q9UGQ3 507 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 VPS4AQ9UN37 437 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 XIRP1Q702N8 1843 aaKnown RBP13.66□□□□□ -0.22
BRAT1-203ENST00000467558 A0A087WXM4 84 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 NEMP2A6NFY4 417 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 NDUFS2O75306 463 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 HOXB6P17509 224 aaKnown RBP13.66□□□□□ -0.22
BRAT1-203ENST00000467558 EPORP19235 508 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 TMPRSS11BQ86T26 416 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 PROSER1Q86XN7 944 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 CMTM8Q8IZV2 173 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 PQLC1Q8N2U9 271 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 AHCYL2Q96HN2 611 aaKnown RBP13.66□□□□□ -0.22
BRAT1-203ENST00000467558 AIF1LQ9BQI0 150 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 AASDHPPTQ9NRN7 309 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 PRDM4Q9UKN5 801 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 ITM2BQ9Y287 266 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 TPRKBQ9Y3C4 175 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 INPPL1O15357 1258 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 IDSP22304 550 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 GDPD4Q6W3E5 623 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 RIPOR3Q96MK2 946 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 RIBC2Q9H4K1 309 aa13.66□□□□□ -0.22
BRAT1-203ENST00000467558 CHRNGP07510 517 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 ASMTP46597 345 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 TM4SF4P48230 202 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 HERVK_113P63132 956 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 SLC10A2Q12908 348 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 BRAT1Q6PJG6 821 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 ARHGAP36Q6ZRI8 547 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 FAM124AQ86V42 546 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 TRAPPC9Q96Q05 1148 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 CYP2S1Q96SQ9 504 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 ERVK-6Q9BXR3 956 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 MRM3Q9HC36 420 aaKnown RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 TAS2R1Q9NYW7 299 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 C3orf18Q9UK00 162 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 H0Y858 1186 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 M0QZQ0 153 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 SLC22A2O15244 555 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 NIPSNAP2O75323 286 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 CNPP09543 421 aaKnown RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 IVDP26440 423 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 SLC26A3P40879 764 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 ERVK-21P61565 698 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 DPYSQ14117 519 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 TCEA2Q15560 299 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 CPTPQ5TA50 214 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 OR14C36Q8NHC7 312 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 PPCDCQ96CD2 204 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 ZNF514Q96K75 400 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 DUSP12Q9UNI6 340 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms