RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C9P02748 559 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 ITGA2BP08514 1039 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 LAMP2P13473 410 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 RPL22P35268 128 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 BLKP51451 505 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 ZBTB6Q15916 424 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 MAPK14Q16539 360 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 DENND5AQ6IQ26 1287 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 VSTM1Q6UX27 236 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CHRDL2Q6WN34 429 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 FRRS1Q6ZNA5 592 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 PIWIL4Q7Z3Z4 852 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 RASGRP3Q8IV61 690 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CLEC4DQ8WXI8 215 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 EXOSC8Q96B26 276 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 AGO3Q9H9G7 860 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 SMURF2Q9HAU4 748 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SNX15Q9NRS6 342 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 TAS2R14Q9NYV8 317 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SIRPGQ9P1W8 387 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 RAI2Q9Y5P3 530 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 NOX1Q9Y5S8 564 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 DYTNA2CJ06 578 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 VSTM5A8MXK1 200 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 PAPSS1O43252 624 aaPredicted RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 MSI1O43347 362 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 RLN1P04808 185 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 DBIP07108 87 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 GPM6BQ13491 265 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 HSDL1Q3SXM5 330 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 TMEM164Q5U3C3 297 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 LCN1P1Q5VSP4 162 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 MED27Q6P2C8 311 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 ARCQ7LC44 396 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CROCCP3Q8IVE0 287 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CFAP206Q8IYR0 622 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 FBXW8Q8N3Y1 598 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CHST4Q8NCG5 386 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 TMEM161BQ8NDZ6 487 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 EFHD2Q96C19 240 aaPredicted RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 TRIM2Q9C040 744 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SRMSQ9H3Y6 488 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CCNB1IP1Q9NPC3 277 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 XPR1Q9UBH6 696 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 RGS17Q9UGC6 210 aaPredicted RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 MAGEL2Q9UJ55 1249 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 FBXW2Q9UKT8 454 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 FAM237BA0A1B0GVD1 139 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SOCS7O14512 581 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 UGT2B11O75310 529 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CDK14O94921 469 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 UROSP10746 265 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 TTKP33981 857 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 AP1S2P56377 157 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 WNT3AP56704 352 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 LSM3P62310 102 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 PCDH1Q08174 1060 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 POTEHQ6S545 545 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 RANBP3LQ86VV4 465 aaPredicted RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 IKZF4Q9H2S9 585 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SNX7Q9UNH6 387 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 Q9Y3F1 56 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 BBIP1A8MTZ0 92 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 WNT7AO00755 349 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 OR1F1O43749 312 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 ZMPSTE24O75844 475 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 ZNF432O94892 652 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SNHG28P0DPA3 235 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 HOXB6P17509 224 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 TACR2P21452 398 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 GMFBP60983 142 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SLC25A52Q3SY17 297 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CXorf57Q6NSI4 855 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 PHF13Q86YI8 300 aaPredicted RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 C12orf29Q8N999 325 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 NETO2Q8NC67 525 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 SGCDQ92629 289 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 ARHGAP9Q9BRR9 750 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 FUT8Q9BYC5 575 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 COMMD4Q9H0A8 199 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CST11Q9H112 138 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 CDH19Q9H159 772 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 GOLGA2P5Q9HBQ8 144 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 OAS3Q9Y6K5 1087 aaKnown RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 ZFP37Q9Y6Q3 630 aaPredicted RBP8.64□□□□□ -1.03
HPS4-209ENST00000466781 E9PAM4 449 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 AGXTP21549 392 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 SGCBQ16585 318 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 ANKS1BQ7Z6G8 1248 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 AMIGO3Q86WK7 504 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 HID1Q8IV36 788 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 SLC34A3Q8N130 599 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 GJD3Q8N144 294 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 SNX33Q8WV41 574 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 INPP4AQ96PE3 977 aaPredicted RBP8.63□□□□□ -1.03
HPS4-209ENST00000466781 LGMNQ99538 433 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 MOCS1Q9NZB8 636 aa8.63□□□□□ -1.03
HPS4-209ENST00000466781 PHF24Q9UPV7 400 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms