RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 JUNDP17535 347 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 MCM3P25205 808 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 EPHA8P29322 1005 aaPredicted RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 POLD2P49005 469 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 B4GALNT1Q00973 533 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 LRP8Q14114 963 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 SEMA3AQ14563 771 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 SHBQ15464 509 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 PYCR3Q53H96 274 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 WDR93Q6P2C0 686 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 MICALCLQ6ZW33 695 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 GALNT13Q8IUC8 556 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 CILP2Q8IUL8 1156 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 HID1Q8IV36 788 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 RBFAQ8N0V3 343 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 SDR16C5Q8N3Y7 309 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 TSACCQ96A04 125 aaPredicted RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 DCUN1D1Q96GG9 259 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 C9orf72Q96LT7 481 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 EDEM2Q9BV94 578 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 GTPBP2Q9BX10 602 aaKnown RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 SLC13A1Q9BZW2 595 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 CARS2Q9HA77 564 aaKnown RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 CYP4F12Q9HCS2 524 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 ARFGAP3Q9NP61 516 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 MRPL40Q9NQ50 206 aaKnown RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 INTS10Q9NVR2 710 aaKnown RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 PCDHGB2Q9Y5G2 931 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 DNMT3AQ9Y6K1 912 aaPredicted RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 FAM186AA6NE01 2351 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 ZFHX2Q9C0A1 2572 aaPredicted RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 KLHL33A6NCF5 533 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 GOLGA8KD6RF30 607 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 GOLGA8TH3BQL2 631 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 GRID2O43424 1007 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 PCDHGA12O60330 932 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 GFRA3O60609 400 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 PIAS2O75928 621 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 TUBBP07437 444 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 ATP1B2P14415 290 aaPredicted RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 ZNF7P17097 686 aaPredicted RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 PMLP29590 882 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 ADARP55265 1226 aaKnown RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 ERCC6LQ2NKX8 1250 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 AASDHQ4L235 1098 aaPredicted RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 BCL7AQ4VC05 210 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 HSP90AA5PQ58FG0 334 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 ZNF648Q5T619 568 aaPredicted RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 KCTD16Q68DU8 428 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 ZNF470Q6ECI4 717 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 CCNI2Q6ZMN8 369 aaPredicted RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 KIAA0408Q6ZU52 694 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 GALNT7Q86SF2 657 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 LRRTM4Q86VH4 590 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 LRRC6Q86X45 466 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 FSTL5Q8N475 847 aaPredicted RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 OTUD6BQ8N6M0 293 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 RASGEF1AQ8N9B8 481 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 OR2M4Q96R27 311 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 LRRC61Q9BV99 259 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 LRRC4CQ9HCJ2 640 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 TMEM9BQ9NQ34 198 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 IL1RAPL1Q9NZN1 696 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 SPASTQ9UBP0 616 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 MOSPD1Q9UJG1 213 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 CSNK1G3Q9Y6M4 447 aa15.79■□□□□ 0.12
GPC1-207ENST00000466624 RIF1Q5UIP0 2472 aaKnown RBP15.79■□□□□ 0.12
GPC1-207ENST00000466624 FRYLO94915 3013 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 F8W8V4 182 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 CDX4O14627 284 aaPredicted RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 KMOO15229 486 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 KCNJ13O60928 360 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 NDUFS3O75489 264 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 GSTM1P09488 218 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 RPS3P23396 243 aaKnown RBP eCLIP15.78■□□□□ 0.12
GPC1-207ENST00000466624 SSTR1P30872 391 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 GNPDA1P46926 289 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 PRLHRP49683 370 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 GPX6P59796 221 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 GSTM4Q03013 218 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 MGAT5Q09328 741 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 SLC14A1Q13336 389 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 ELOCQ15369 112 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 ZNF542PQ5EBM4 170 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 PRAMEF14Q5SWL7 426 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 TRMT10BQ6PF06 316 aaKnown RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 C3orf62Q6ZUJ4 267 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 MARK2Q7KZI7 788 aaKnown RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 KANSL1Q7Z3B3 1105 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 RD3Q7Z3Z2 195 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 ZNF547Q8IVP9 402 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 UNC5BQ8IZJ1 945 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 C2CD4AQ8NCU7 369 aaPredicted RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 ZNF548Q8NEK5 533 aaPredicted RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 GPBAR1Q8TDU6 330 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 SAP25Q8TEE9 199 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 LINC00615Q96LM1 132 aaPredicted RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 TIMM29Q9BSF4 260 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 BOCQ9BWV1 1114 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 TCEAL2Q9H3H9 227 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms