RNA–Protein interactions for RNA: ENST00000466342.1

SQSTM1-206, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 808 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-206ENST00000466342 CATSPER2Q96P56 530 aa11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 SMIM14Q96QK8 99 aa11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 FICDQ9BVA6 458 aa11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 B3GNT4Q9C0J1 378 aa11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 GOLGA6AQ9NYA3 693 aa11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 FOXJ2Q9P0K8 574 aa11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 PAK5Q9P286 719 aa11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 PNMA8BQ9ULN7 279 aaPredicted RBP11.82□□□□□ -0.52
SQSTM1-206ENST00000466342 A0A1W2PQM1 296 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 C9orf172C9J069 976 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 YY2O15391 372 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 FGF1P05230 155 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 CTSEP14091 401 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 ETS1P14921 441 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 TSHRP16473 764 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 GM2AP17900 193 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 TNFRSF8P28908 595 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 ADRA1AP35348 466 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 TRIM23P36406 574 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 FDFT1P37268 417 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 CHRNA4P43681 627 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 MAPK10P53779 464 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 KLRB1Q12918 225 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 C1orf61Q13536 156 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 NFATC4Q14934 902 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 ACOX1Q15067 660 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 SIRPB2Q5JXA9 342 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 KCTD11Q693B1 232 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 CCDC137Q6PK04 289 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 ENPP7Q6UWV6 458 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 C4orf22Q6V702 233 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 RANBP10Q6VN20 620 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 PRUNE1Q86TP1 453 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 HID1Q8IV36 788 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 LRRC45Q96CN5 670 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 COQ10AQ96MF6 247 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 WDR92Q96MX6 357 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 SRPK1Q96SB4 655 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 LRRC61Q9BV99 259 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 CLPBQ9H078 707 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 TCEAL2Q9H3H9 227 aaPredicted RBP11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 MAGEE1Q9HCI5 957 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 RNF14Q9UBS8 474 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 ESPL1Q14674 2120 aa11.81□□□□□ -0.52
SQSTM1-206ENST00000466342 A0A0U1RQS6 177 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 C1orf232A0A0U1RR37 186 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 ERI2A8K979 691 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 CACNB4O00305 520 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 PDE2AO00408 941 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 TNFRSF10CO14798 259 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 PSMD3O43242 534 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 CLDN7O95471 211 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 AGTP01019 485 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 TNFP01375 233 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 PCCBP05166 539 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 RPLP0P05388 317 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 ZSCAN5DPP0CG00 497 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 KELP23276 732 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 RPL22P35268 128 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 COILP38432 576 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 FNTAP49354 379 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 STC1P52823 247 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 MLLT10P55197 1068 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 KIAA1024LP59773 190 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 SRP54P61011 504 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 PTSQ03393 145 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 ZFP36L1Q07352 338 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 TMEM164Q5U3C3 297 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 DENND2CQ68D51 928 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 HSD11B1LQ7Z5J1 315 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 RAVER1Q8IY67 606 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 CBARPQ8N350 705 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 TAB3Q8N5C8 712 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 SLC25A41Q8N5S1 370 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 PLA2G15Q8NCC3 412 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 GRK7Q8WTQ7 553 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 JPH3Q8WXH2 748 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 NKD1Q969G9 470 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 TSACCQ96A04 125 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 CCDC74AQ96AQ1 378 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 NUS1Q96E22 293 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 DTD2Q96FN9 168 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 ABHD17AQ96GS6 310 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 CMKLR1Q99788 373 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 TBL1YQ9BQ87 522 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 LRRN3Q9H3W5 708 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 LRRC40Q9H9A6 602 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 ETNK1Q9HBU6 452 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 CUEDC1Q9NWM3 386 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 GULP1Q9UBP9 304 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 DOLKQ9UPQ8 538 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 ZNF711Q9Y462 761 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 OR1A2Q9Y585 309 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 DGKBQ9Y6T7 804 aa11.8□□□□□ -0.52
SQSTM1-206ENST00000466342 STMND1H3BQB6 276 aa11.79□□□□□ -0.52
SQSTM1-206ENST00000466342 AGRPO00253 132 aa11.79□□□□□ -0.52
SQSTM1-206ENST00000466342 VPS4BO75351 444 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms