RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 PPP2R2AP63151 447 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 MRPS21P82921 87 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 PDE1BQ01064 536 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 PFKPQ01813 784 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 BCL2L1Q07817 233 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 DNAJC3Q13217 504 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 KLHL38Q2WGJ6 581 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 FBXO43Q4G163 708 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 ANKRD20A4Q4UJ75 823 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 HABP4Q5JVS0 413 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 AGBL2Q5U5Z8 902 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TRIM68Q6AZZ1 485 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 C22orf39Q6P5X5 142 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SPATC1Q76KD6 591 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 GALNT7Q86SF2 657 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 CCDC25Q86WR0 208 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 NDUFAF2Q8N183 169 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 CBARPQ8N350 705 aaPredicted RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 DNAAF3Q8N9W5 541 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TERB1Q8NA31 727 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 RCBTB1Q8NDN9 531 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TMIEQ8NEW7 156 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 IPMKQ8NFU5 416 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 OR2A12Q8NGT7 310 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 GABPB2Q8TAK5 448 aaPredicted RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 CSGALNACT1Q8TDX6 532 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 UBLCP1Q8WVY7 318 aaPredicted RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 PIH1D2Q8WWB5 315 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 CHFRQ96EP1 664 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 STAMBPL1Q96FJ0 436 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SCRN2Q96FV2 425 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 NSMCE3Q96MG7 304 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 PWWP2AQ96N64 755 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 GUCD1Q96NT3 240 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 CYTH2Q99418 400 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 HEPHQ9BQS7 1158 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 WDR83Q9BRX9 315 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 RPP25Q9BUL9 199 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 FICDQ9BVA6 458 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 FSD1LQ9BXM9 530 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 ADGRE3Q9BY15 652 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 ATP13A3Q9H7F0 1226 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 BRD9Q9H8M2 597 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 PLAC1Q9HBJ0 212 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TMBIM4Q9HC24 238 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TREX1Q9NSU2 369 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 DNAJC17Q9NVM6 304 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 NSMCE4AQ9NXX6 385 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 EURLQ9NYK6 297 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SAMD15Q9P1V8 674 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 VPS18Q9P253 973 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 LGALS13Q9UHV8 139 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SLCO3A1Q9UIG8 710 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 CDH22Q9UJ99 828 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 PLAAQ9Y263 795 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TCAF1Q9Y4C2 921 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 RAI2Q9Y5P3 530 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 ACTL7AQ9Y615 435 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 NUMBLQ9Y6R0 609 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 A0A0J9YYE9 177 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 EDDM13A0A1B0GTR0 161 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 TCRBV9S1A1TA0A576 114 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 BLACEA4D250 179 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 RGSL1A5PLK6 1076 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 C2CD4DB7Z1M9 353 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 PRRT4C9JH25 899 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 GOLGA8KD6RF30 607 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 K7ERQ8 282 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 MAN2B1O00754 1011 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 RASGRF2O14827 1237 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 LDB2O43679 373 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CDH16O75309 829 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 AVILO75366 819 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 PMPCBO75439 489 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 KAT7O95251 611 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 PGLSO95336 258 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CRTAMO95727 393 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CPP00450 1065 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 TRBC1P01850 177 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 SNRPB2P08579 225 aaKnown RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 KCNA5P22460 613 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CNTFP26441 200 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 SERPINA4P29622 427 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 ATP5DP30049 168 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 HADHAP40939 763 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 RECQLP46063 649 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 ARCN1P48444 511 aaKnown RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 SERPINB9P50453 376 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 GFRA1P56159 465 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 SESN2P58004 480 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 ZNF844Q08AG5 666 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 MGAT5Q09328 741 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 TRAF2Q12933 501 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 SPARCL1Q14515 664 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 FASTKD3Q14CZ7 662 aaKnown RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 TAF1AQ15573 450 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 CDKN3Q16667 212 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 KCTD19Q17RG1 926 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 SKIDA1Q1XH10 827 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 HNRNPA1L2Q32P51 320 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms