RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 K7ESM1 405 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 AREL1O15033 823 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 SCAMP1O15126 338 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 EIF3HO15372 352 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATG3-203ENST00000465980 ATP8B1O43520 1251 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 ANXA9O76027 345 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 SUN1O94901 812 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 AP2A1O95782 977 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 PRKCGP05129 697 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 APRTP07741 180 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 GOLGA6DP0CG33 693 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 GIMD1P0DJR0 217 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 ACP1P24666 158 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 RABIFP47224 123 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 RGRP47804 291 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 LMAN1P49257 510 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 THOP1P52888 689 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 ARL4CP56559 192 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 SARNPP82979 210 aaKnown RBP9.39□□□□□ -0.91
ATG3-203ENST00000465980 C1orf61Q13536 156 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 CASP8Q14790 479 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 CYTH1Q15438 398 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 DEFB133Q30KQ1 61 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 INO80DQ53TQ3 878 aaPredicted RBP9.39□□□□□ -0.91
ATG3-203ENST00000465980 CFAP58Q5T655 872 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 KCTD11Q693B1 232 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 CENPUQ71F23 418 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 HDXQ7Z353 690 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 DCP2Q8IU60 420 aaKnown RBP9.39□□□□□ -0.91
ATG3-203ENST00000465980 PDIK1LQ8N165 341 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 DTWD1Q8N5C7 304 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 LMX1AQ8TE12 382 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 LRIG1Q96JA1 1093 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 APOLD1Q96LR9 279 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 PWWP2AQ96N64 755 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 PSKH2Q96QS6 385 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 RBM15Q96T37 977 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATG3-203ENST00000465980 MLPHQ9BV36 600 aaPredicted RBP9.39□□□□□ -0.91
ATG3-203ENST00000465980 FUT8Q9BYC5 575 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 SLC25A51Q9H1U9 297 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 TCEAL2Q9H3H9 227 aaPredicted RBP9.39□□□□□ -0.91
ATG3-203ENST00000465980 NT5MQ9NPB1 228 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 GPR27Q9NS67 375 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 HAUS2Q9NVX0 235 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 ZNF446Q9NWS9 450 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 GOLGA6AQ9NYA3 693 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 NLGN3Q9NZ94 848 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 SEPT3Q9UH03 358 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 AAR2Q9Y312 384 aaKnown RBP9.39□□□□□ -0.91
ATG3-203ENST00000465980 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
ATG3-203ENST00000465980 LY6G6EA0A0G2JKS1 128 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 CPED1A4D0V7 1026 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 NEMP2A6NFY4 417 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 F5H423 210 aaPredicted RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 GOLGA8MH3BSY2 632 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 AQP9O43315 295 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 RGS9O75916 674 aaPredicted RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 TM7SF2O76062 418 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 CSF2P04141 144 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 CDK4P11802 303 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 MLNP12872 115 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 NME1P15531 152 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 CES1P23141 567 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 MAGEA4P43358 317 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 PMS2P54278 862 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 GEMP55040 296 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 PFN3P60673 137 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 EIF2B5Q13144 721 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 ILKQ13418 452 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 ZNF235Q14590 738 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 IRF4Q15306 451 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 CDKN3Q16667 212 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 FNBP1LQ5T0N5 605 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 ALG1LQ6GMV1 187 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 LRRC8BQ6P9F7 803 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 CRTC1Q6UUV9 634 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 SHISA2Q6UWI4 295 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 ZNF534Q76KX8 674 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 TRMT10CQ7L0Y3 403 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 CCDC25Q86WR0 208 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 ZSWIM9Q86XI8 627 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 CAMK1DQ8IU85 385 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 PGBD5Q8N414 524 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 DENND6BQ8NEG7 585 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 ARRDC2Q8TBH0 407 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 TP53INP1Q96A56 240 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 TADA1Q96BN2 335 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 IFT43Q96FT9 208 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 IMP4Q96G21 291 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 CRELD1Q96HD1 420 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 OXNAD1Q96HP4 312 aaPredicted RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 SERPINB12Q96P63 405 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 LENG8Q96PV6 779 aaPredicted RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 CINPQ9BW66 212 aaPredicted RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 C1QTNF7Q9BXJ2 289 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 LRRC40Q9H9A6 602 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 VIPAS39Q9H9C1 493 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 XAB2Q9HCS7 855 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 PCDH12Q9NPG4 1184 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms