RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SYNDIG1Q9H7V2 258 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 ASIC3Q9UHC3 531 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 RNF215Q9Y6U7 377 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 SCN8AQ9UQD0 1980 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 ACACBO00763 2458 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 PLXNB3Q9ULL4 1909 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 VEGFDO43915 354 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 SNX2O60749 519 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 EML2O95834 649 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 IVDP26440 423 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 XIAPP98170 497 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 CDH17Q12864 832 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 GTF2H3Q13889 308 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 HLTFQ14527 1009 aaKnown RBP eCLIP16.81■□□□□ 0.28
VPS52-215ENST00000464425 CCDC38Q502W7 563 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 LDLRAP1Q5SW96 308 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 NAGSQ8N159 534 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 CPT1BQ92523 772 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 TTC25Q96NG3 672 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 KLC4Q9NSK0 619 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 LRIT1Q9P2V4 623 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 SLC23A2Q9UGH3 650 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 APPL1Q9UKG1 709 aa16.81■□□□□ 0.28
VPS52-215ENST00000464425 GPR89AB7ZAQ6 455 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 CHUKO15111 745 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 RAD51CO43502 376 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 GPR89BP0CG08 455 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 GLB1P16278 677 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 HADHAP40939 763 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 CCL7P80098 99 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 SARNPP82979 210 aaKnown RBP16.8■□□□□ 0.28
VPS52-215ENST00000464425 NFATC2Q13469 925 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 BIRC2Q13490 618 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 PEX6Q13608 980 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 GLE1Q53GS7 698 aaKnown RBP16.8■□□□□ 0.28
VPS52-215ENST00000464425 CDCP2Q5VXM1 449 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 UNQ6494/PRO21346Q6UXR6 183 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 LRRTM4Q86VH4 590 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 TRAPPC5Q8IUR0 188 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 ZNF547Q8IVP9 402 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 PPIL6Q8IXY8 311 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 RASGEF1AQ8N9B8 481 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 MCUQ8NE86 351 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 DDHD1Q8NEL9 900 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 OR6C4Q8NGE1 309 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 C19orf43Q9BQ61 176 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 ERP44Q9BS26 406 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 TMEM121BQ9BXQ6 578 aaPredicted RBP16.8■□□□□ 0.28
VPS52-215ENST00000464425 CASS4Q9NQ75 786 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 TBC1D29Q9UFV1 150 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 CRLS1Q9UJA2 301 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 DNAJC16Q9Y2G8 782 aa16.8■□□□□ 0.28
VPS52-215ENST00000464425 AKAP13Q12802 2813 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 TRABD2BA6NFA1 517 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 SMAPO00193 183 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 DNALI1O14645 258 aaPredicted RBP16.79■□□□□ 0.28
VPS52-215ENST00000464425 NDC80O14777 642 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 KMOO15229 486 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 ZNF7P17097 686 aaPredicted RBP16.79■□□□□ 0.28
VPS52-215ENST00000464425 MSH3P20585 1137 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 ITGALP20701 1170 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 AKT1P31749 480 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 MC4RP32245 332 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 CTSCP53634 463 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 INSCQ1MX18 579 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 RNASEH2BQ5TBB1 312 aaKnown RBP16.79■□□□□ 0.28
VPS52-215ENST00000464425 LRRC8BQ6P9F7 803 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 DET1Q7L5Y6 550 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 HOOK3Q86VS8 718 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 C17orf82Q86X59 251 aaPredicted RBP16.79■□□□□ 0.28
VPS52-215ENST00000464425 DCBLD1Q8N8Z6 715 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 NAT8LQ8N9F0 302 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 STYXQ8WUJ0 223 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 NAT14Q8WUY8 206 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 CDKN2AIPNLQ96HQ2 116 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 TRIM51Q9BSJ1 452 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 OSGEPL1Q9H4B0 414 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 PRDM8Q9NQV8 689 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 NLE1Q9NVX2 485 aaPredicted RBP16.79■□□□□ 0.28
VPS52-215ENST00000464425 SMOXQ9NWM0 555 aa16.79■□□□□ 0.28
VPS52-215ENST00000464425 UTP11Q9Y3A2 253 aaKnown RBP16.79■□□□□ 0.28
VPS52-215ENST00000464425 FRYQ5TBA9 3013 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 TCRBV7S3A2A0A539 114 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 MROH6A6NGR9 719 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 OR2AG2A6NM03 316 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 RHPN2P1A8MT19 583 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 EFCAB8A8MWE9 144 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 NUDT21O43809 227 aaKnown RBP16.78■□□□□ 0.28
VPS52-215ENST00000464425 CSO75390 466 aaKnown RBP16.78■□□□□ 0.28
VPS52-215ENST00000464425 RPLP0P05388 317 aaKnown RBP16.78■□□□□ 0.28
VPS52-215ENST00000464425 PRSS56P0CW18 603 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 MLNP12872 115 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 NPY2RP49146 381 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 CDKN1CP49918 316 aaPredicted RBP16.78■□□□□ 0.28
VPS52-215ENST00000464425 DRG2P55039 364 aaKnown RBP16.78■□□□□ 0.28
VPS52-215ENST00000464425 SESN2P58004 480 aaPredicted RBP16.78■□□□□ 0.28
VPS52-215ENST00000464425 CAMK2BQ13554 666 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 LAMB3Q13751 1172 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 ZRANB3Q5FWF4 1079 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms