RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 MN1Q10571 1320 aaPredicted RBP14.29□□□□□ -0.12
ALMS1-202ENST00000464408 SPENQ96T58 3664 aaKnown RBP14.29□□□□□ -0.12
ALMS1-202ENST00000464408 NBASA2RRP1 2371 aa14.29□□□□□ -0.12
ALMS1-202ENST00000464408 UBR5O95071 2799 aaPredicted RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 OR52A4PA6NMU1 304 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 PDZK1P1A8MUH7 402 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 TERTO14746 1132 aaKnown RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 CST8O60676 142 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 WISP1O95388 367 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 C9P02748 559 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 SLC2A4P14672 509 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 ZFXP17010 805 aaPredicted RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 XRCC1P18887 633 aaPredicted RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 NFKB1P19838 968 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 LEPRP48357 1165 aaKnown RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 PTPN13Q12923 2485 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 SLC14A2Q15849 920 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 KDELC1Q6UW63 502 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 TMEM26Q6ZUK4 368 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 C11orf96Q7Z7L8 435 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 LRRTM4Q86VH4 590 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 NLGN4XQ8N0W4 816 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 TTC30BQ8N4P2 665 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 SLC25A41Q8N5S1 370 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 RNF214Q8ND24 703 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 NLGN4YQ8NFZ3 816 aaPredicted RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 RSC1A1Q92681 617 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 OXNAD1Q96HP4 312 aaPredicted RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 FBXO8Q9NRD0 319 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 DDX56Q9NY93 547 aaKnown RBP14.28□□□□□ -0.12
ALMS1-202ENST00000464408 WDR37Q9Y2I8 494 aa14.28□□□□□ -0.12
ALMS1-202ENST00000464408 OR5K4A6NMS3 321 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 CYSRT1A8MQ03 144 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 KMOO15229 486 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 BUD23O43709 281 aaKnown RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 SPOPO43791 374 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 KIF1CO43896 1103 aaKnown RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 STK17BO94768 372 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 UBXN7O94888 489 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 DLGAP3O95886 979 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 VIPP01282 170 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 PRKAR1AP10644 381 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 ZNF28P17035 718 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 SEPHS1P49903 392 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 POLE2P56282 527 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 WNT3AP56704 352 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 PPP1CAP62136 330 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 SH3BP2P78314 561 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 PTPRCAPQ14761 206 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 SIRPB2Q5JXA9 342 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 ATP1A1-AS1Q5TC04 95 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 PDPK2PQ6A1A2 396 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 BORAQ6PGQ7 559 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 XKR5Q6UX68 686 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 CEACAM20Q6UY09 585 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 SPOCD1Q6ZMY3 1216 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 NAT14Q8WUY8 206 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 TFB1MQ8WVM0 346 aaKnown RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 MRGPRX2Q96LB1 330 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 C9orf72Q96LT7 481 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 TGM7Q96PF1 710 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 TEFMQ96QE5 360 aaKnown RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 TIMM29Q9BSF4 260 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 CLMPQ9H6B4 373 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 C10orf88Q9H8K7 445 aa14.27□□□□□ -0.13
ALMS1-202ENST00000464408 GPN2Q9H9Y4 310 aaPredicted RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 GEMIN8Q9NWZ8 242 aaKnown RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 MRPS18BQ9Y676 258 aaKnown RBP14.27□□□□□ -0.13
ALMS1-202ENST00000464408 LOC285095A0A1B0GVY8 99 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 GPR89AB7ZAQ6 455 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 POLR1CO15160 346 aaPredicted RBP14.26□□□□□ -0.13
ALMS1-202ENST00000464408 SUV39H1O43463 412 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 UGT1A9O60656 530 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 PPFIA2O75334 1257 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 CDK14O94921 469 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 ANKRD34CP0C6C1 535 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 GPR89BP0CG08 455 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 UGT1A6P19224 532 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 UGT1A1P22309 533 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 UGT1A4P22310 534 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 F8A1P23610 371 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 SLC1A1P43005 524 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 CTSCP53634 463 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 KCNC4Q03721 635 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 FOXM1Q08050 763 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 TBX2Q13207 712 aaPredicted RBP14.26□□□□□ -0.13
ALMS1-202ENST00000464408 GPR18Q14330 331 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 TCEAL1Q15170 157 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 ODF2Q5BJF6 829 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 PTRH1Q86Y79 214 aaKnown RBP14.26□□□□□ -0.13
ALMS1-202ENST00000464408 PLXDC1Q8IUK5 500 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 TRAPPC5Q8IUR0 188 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 TRIM48Q8IWZ4 208 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 ZNF567Q8N184 647 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 GPR150Q8NGU9 434 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 SLC45A3Q96JT2 553 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 VPS35Q96QK1 796 aa14.26□□□□□ -0.13
ALMS1-202ENST00000464408 GORASP1Q9BQQ3 440 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms