RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TMEM245Q9H330 911 aa14.41□□□□□ -0.1
COL5A1-205ENST00000464187 ZDHHC4Q9NPG8 344 aa14.41□□□□□ -0.1
COL5A1-205ENST00000464187 CATSPERZQ9NTU4 200 aa14.41□□□□□ -0.1
COL5A1-205ENST00000464187 ZNF711Q9Y462 761 aa14.41□□□□□ -0.1
COL5A1-205ENST00000464187 PRSS56P0CW18 603 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 OGNP20774 298 aaKnown RBP14.4□□□□□ -0.1
COL5A1-205ENST00000464187 HNF1BP35680 557 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 HMGCLP35914 325 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 VHLP40337 213 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 SLC26A3P40879 764 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 TYSND1Q2T9J0 566 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 TMEM198Q66K66 360 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 MRNIPQ6NTE8 343 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 GPR153Q6NV75 609 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 LYSMD3Q7Z3D4 306 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 DEFB107AQ8IZN7 70 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 SLC44A3Q8N4M1 653 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 TTC30BQ8N4P2 665 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 DEFB123Q8N688 67 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 OR4L1Q8NH43 312 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 N4BP2L2Q92802 583 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-205ENST00000464187 EID2BQ96D98 161 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 CDKN2AIPNLQ96HQ2 116 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 MAELQ96JY0 434 aaKnown RBP14.4□□□□□ -0.1
COL5A1-205ENST00000464187 CATSPER2Q96P56 530 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 P2RY13Q9BPV8 354 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 GPR63Q9BZJ6 419 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 ALG9Q9H6U8 611 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 NLE1Q9NVX2 485 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-205ENST00000464187 THAP10Q9P2Z0 257 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-205ENST00000464187 HCN2Q9UL51 889 aa14.4□□□□□ -0.1
COL5A1-205ENST00000464187 CORO1CQ9ULV4 474 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-205ENST00000464187 G3BP2Q9UN86 482 aaKnown RBP14.4□□□□□ -0.1
COL5A1-205ENST00000464187 C1orf232A0A0U1RR37 186 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 EDDM13A0A1B0GTR0 161 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 A0A1W2PQ67 120 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 CAPN8A6NHC0 703 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 SDHDO14521 159 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 PDE5AO76074 875 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 SORBS2O94875 1100 aaKnown RBP14.39□□□□□ -0.11
COL5A1-205ENST00000464187 CTHP32929 405 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 PPARGP37231 505 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-205ENST00000464187 IL12RB1P42701 662 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 SUOXP51687 545 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 STC1P52823 247 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 SMAD2Q15796 467 aaKnown RBP14.39□□□□□ -0.11
COL5A1-205ENST00000464187 C9orf64Q5T6V5 341 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 EGFLAMQ63HQ2 1017 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 NXNQ6DKJ4 435 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 BRAT1Q6PJG6 821 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 TXNDC11Q6PKC3 985 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 LRRC74BQ6ZQY2 392 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 RPS27LQ71UM5 84 aaKnown RBP14.39□□□□□ -0.11
COL5A1-205ENST00000464187 PTERQ96BW5 349 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 SCRN2Q96FV2 425 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 LRIG1Q96JA1 1093 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 MARK4Q96L34 752 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 LYSMD1Q96S90 227 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 ACOX2Q99424 681 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 ZFYVE1Q9HBF4 777 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 BPIFA1Q9NP55 256 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 TNFRSF12AQ9NP84 129 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 NMRK1Q9NWW6 199 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 PPIL1Q9Y3C6 166 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 SCN8AQ9UQD0 1980 aa14.39□□□□□ -0.11
COL5A1-205ENST00000464187 NPIPB15A6NHN6 443 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 A8MX80 341 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 SLC22A2O15244 555 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 STX7O15400 261 aaKnown RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 ASGR2P07307 311 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 PSMA3P25788 255 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 KCNC1P48547 511 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 ERFP50548 548 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 POLR2LP62875 67 aaKnown RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 ILF2Q12905 390 aaKnown RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 CDKN3Q16667 212 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 CMPK2Q5EBM0 449 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 USP45Q70EL2 814 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 ISCA2Q86U28 154 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 SNX32Q86XE0 403 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 SLC22A9Q8IVM8 553 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 STK40Q8N2I9 435 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 PHF21BQ96EK2 531 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 NAF1Q96HR8 494 aaKnown RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 AARSD1Q9BTE6 412 aaKnown RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 GSTO2Q9H4Y5 243 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 TRPV5Q9NQA5 729 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 HEBP1Q9NRV9 189 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 POLR3BQ9NW08 1133 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 PKP3Q9Y446 797 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 KIAA1549LQ6ZVL6 1849 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 TRPC5OSA6NMA1 111 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 NVLO15381 856 aaKnown RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 CLDN7O95471 211 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 EPHX1P07099 455 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 CD1DP15813 335 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 SEMG2Q02383 582 aa14.38□□□□□ -0.11
COL5A1-205ENST00000464187 TBL3Q12788 808 aaKnown RBP14.38□□□□□ -0.11
COL5A1-205ENST00000464187 ELAVL3Q14576 367 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms