RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 MEI4A8MW99 385 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 SCDO00767 359 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 MCF2LO15068 1137 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ZNF185O15231 689 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ALOX15BO15296 676 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 PLRG1O43660 514 aaKnown RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 SH3BP5O60239 455 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 OPHN1O60890 802 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 SRGAP2O75044 1071 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 RTN2O75298 545 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 H2AFYO75367 372 aaKnown RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 MOCS3O95396 460 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 IL1BP01584 269 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 CALB1P05937 261 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 PLEKP08567 350 aaPredicted RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 ZNF883P0CG24 379 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ACADMP11310 421 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 SKILP12757 684 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 FERP16591 822 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 GOT1P17174 413 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 VAMP1P23763 118 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 CD27P26842 260 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 APEX1P27695 318 aaKnown RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 OR1E1P30953 314 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 SDC4P31431 198 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 NSFP46459 744 aaKnown RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 SERPINH1P50454 418 aaKnown RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 CCR5P51681 352 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ST8SIA6P61647 398 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 GNA12Q03113 381 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 GFPT1Q06210 699 aaPredicted RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 CNTN1Q12860 1018 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 CA9Q16790 459 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 HLA-BQ31612 363 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 POM121L1PQ3SYA9 428 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 TTC31Q49AM3 519 aaPredicted RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 WDR45BQ5MNZ6 344 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 SYCP2LQ5T4T6 812 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 DAB2IPQ5VWQ8 1189 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 C22orf39Q6P5X5 142 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ZNF783Q6ZMS7 281 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 DPY19L3Q6ZPD9 716 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 KANSL1Q7Z3B3 1105 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 RABEPKQ7Z6M1 372 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 DRC7Q8IY82 874 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 MSANTD4Q8NCY6 345 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ANKRD20A12PQ8NF67 263 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 OR2T34Q8NGX1 318 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 OR8D1Q8WZ84 308 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ARHGEF2Q92974 986 aaKnown RBP5.41□□□□□ -1.54
CD46-211ENST00000464082 NSMCE3Q96MG7 304 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 MCEEQ96PE7 176 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ZYG11BQ9C0D3 744 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 PDFQ9HBH1 243 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 OR12D3Q9UGF7 316 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 FZD10Q9ULW2 581 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 BTBD3Q9Y2F9 522 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 ZFYVE26Q68DK2 2539 aa5.41□□□□□ -1.54
CD46-211ENST00000464082 PTPRQQ9UMZ3 2332 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 DSPP15924 2871 aaKnown RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 PIKFYVEQ9Y2I7 2098 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 CXorf51AA0A1B0GTR3 108 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 TMCO5BA8MYB1 307 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 VILLO15195 856 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 SLC7A4O43246 635 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 RNASEH2AO75792 299 aaKnown RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 FSBPO95073 299 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 GYPCP04921 128 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 TPM2P07951 284 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 GZMAP12544 262 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 GNSP15586 552 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 TCF4P15884 667 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 IL1R2P27930 398 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 GKP32189 559 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 CCNHP51946 323 aaPredicted RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 SLC14A1Q13336 389 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 FGL2Q14314 439 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 ZNF284Q2VY69 593 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 ZSCAN23Q3MJ62 389 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 SP5Q6BEB4 398 aaPredicted RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 TXNRD3NBQ6F5E7 133 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 DNAJC24Q6P3W2 148 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 GLRX5Q86SX6 157 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 TRIM69Q86WT6 500 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 SPATS2Q86XZ4 545 aaKnown RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 NAXDQ8IW45 347 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 ARHGAP12Q8IWW6 846 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 RTL3Q8N8U3 475 aaKnown RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 ATP11CQ8NB49 1132 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 OR14C36Q8NHC7 312 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 SNX19Q92543 992 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 GFM2Q969S9 779 aaKnown RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 TBC1D31Q96DN5 1066 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 VCPIP1Q96JH7 1222 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 CNPY3Q9BT09 278 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 SNRNP25Q9BV90 132 aaKnown RBP5.4□□□□□ -1.54
CD46-211ENST00000464082 SELENOOQ9BVL4 669 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 EDEM3Q9BZQ6 932 aa5.4□□□□□ -1.54
CD46-211ENST00000464082 TGIF2Q9GZN2 237 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms