RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ATP1A2P50993 1020 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 TMEM115Q12893 351 aaPredicted RBP18.58■□□□□ 0.56
SF3A1-205ENST00000463818 DCAF12Q5T6F0 453 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 C11orf63Q6NUN7 778 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 DAAM2Q86T65 1068 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 ZNF547Q8IVP9 402 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 BMPERQ8N8U9 685 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 AVL9Q8NBF6 648 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 EXTL1Q92935 676 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 VPS35Q96QK1 796 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 IL26Q9NPH9 171 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 KLHL3Q9UH77 587 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 SCN8AQ9UQD0 1980 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 VIPP01282 170 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A3P35503 534 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 MC2RQ01718 297 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 ANKS6Q68DC2 871 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 TMEM26Q6ZUK4 368 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 BBS12Q6ZW61 710 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 IPMKQ8NFU5 416 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 GDAP1Q8TB36 358 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 QKIQ96PU8 341 aaKnown RBP eCLIP18.57■□□□□ 0.56
SF3A1-205ENST00000463818 TIMM29Q9BSF4 260 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 EPB41L1Q9H4G0 881 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 C10orf88Q9H8K7 445 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 UCK1Q9HA47 277 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 LUC7LQ9NQ29 371 aaKnown RBP18.57■□□□□ 0.56
SF3A1-205ENST00000463818 IL17CQ9P0M4 197 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 ZNF624Q9P2J8 865 aaPredicted RBP18.57■□□□□ 0.56
SF3A1-205ENST00000463818 TRHDEQ9UKU6 1024 aa18.57■□□□□ 0.56
SF3A1-205ENST00000463818 EPN1Q9Y6I3 576 aaPredicted RBP18.57■□□□□ 0.56
SF3A1-205ENST00000463818 LILRA5A6NI73 299 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 PRR19A6NJB7 356 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 PDZK1P1A8MUH7 402 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 B8ZZF3 427 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 H7C0C1 242 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 BUD23O43709 281 aaKnown RBP18.56■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A9O60656 530 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 ITGB2P05107 769 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A6P19224 532 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 IDSP22304 550 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A1P22309 533 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A4P22310 534 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 RPL10P27635 214 aaKnown RBP18.56■□□□□ 0.56
SF3A1-205ENST00000463818 ATP5OP48047 213 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 RAB15P59190 212 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 CYP4F2P78329 520 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 MPP3Q13368 585 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 XRCC4Q13426 336 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 SLC1A5Q15758 541 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 CHRNA6Q15825 494 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 SEPT7Q16181 437 aaKnown RBP18.56■□□□□ 0.56
SF3A1-205ENST00000463818 PPP2R5EQ16537 467 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 ZDHHC20Q5W0Z9 365 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 ABRAXAS1Q6UWZ7 409 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 PLXDC1Q8IUK5 500 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 TRIM48Q8IWZ4 208 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 CACNA2D3Q8IZS8 1091 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 IL22RA1Q8N6P7 574 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 DTX3LQ8TDB6 740 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 BRSK1Q8TDC3 778 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 BLOC1S5Q8TDH9 187 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 TTC25Q96NG3 672 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 CTRCQ99895 268 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 ARHGAP9Q9BRR9 750 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A7Q9HAW7 530 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A10Q9HAW8 530 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 UGT1A8Q9HAW9 530 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 FBXO8Q9NRD0 319 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 HACD3Q9P035 362 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 RSPH14Q9UHP6 348 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 SLC30A1Q9Y6M5 507 aa18.56■□□□□ 0.56
SF3A1-205ENST00000463818 ZNF462Q96JM2 2506 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 ATMQ13315 3056 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 RCCD1A6NED2 376 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 APOC4-APOC2K7ER74 178 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 AGTP01019 485 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 APOC2P02655 101 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 BRAFP15056 766 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 TYRP1P17643 537 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 HLA-DPA1P20036 260 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 RBL1P28749 1068 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 SPAM1P38567 509 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 GTF2H3Q13889 308 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 CCDC181Q5TID7 509 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 XKR5Q6UX68 686 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 WASH2PQ6VEQ5 465 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 C11orf96Q7Z7L8 435 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 TRAPPC5Q8IUR0 188 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 RTP4Q96DX8 246 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 TEFMQ96QE5 360 aaKnown RBP18.55■□□□□ 0.56
SF3A1-205ENST00000463818 SPRY4Q9C004 299 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 WASH6PQ9NQA3 447 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.55■□□□□ 0.56
SF3A1-205ENST00000463818 OGFRQ9NZT2 677 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 TRIM10Q9UDY6 481 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 PCDHA3Q9Y5H8 950 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 CFAP46Q8IYW2 2715 aa18.55■□□□□ 0.56
SF3A1-205ENST00000463818 GCN1Q92616 2671 aaKnown RBP18.55■□□□□ 0.56
SF3A1-205ENST00000463818 SOWAHDA6NJG2 315 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms