RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 B3GALNT2Q8NCR0 500 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 OSCP1Q8WVF1 389 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 PANX2Q96RD6 677 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 TSPAN18Q96SJ8 248 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 CPXM1Q96SM3 734 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 BAG1Q99933 345 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 NUP58Q9BVL2 599 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 TPSD1Q9BZJ3 242 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 GOLPH3Q9H4A6 298 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 CYP3A43Q9HB55 503 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 FSCN3Q9NQT6 498 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MRPS18AQ9NVS2 196 aaKnown RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 JKAMPQ9P055 326 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MYO18BQ8IUG5 2567 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SPAG17Q6Q759 2223 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 A0A1W2PS29 197 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 CAPN8A6NHC0 703 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 E9PAM4 449 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 E9PLN8 166 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SLC43A1O75387 559 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SERPING1P05155 500 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 TPM3P06753 285 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 HAPLN1P10915 354 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 PAX3P23760 479 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 FOLR3P41439 243 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MAPK10P53779 464 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 ATXN3P54252 364 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MAP3K7CLP57077 242 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 OGDHQ02218 1023 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SRSF1Q07955 248 aaKnown RBP eCLIP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SMARCB1Q12824 385 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 DYRK1AQ13627 763 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 PREPLQ4J6C6 727 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SLC39A12Q504Y0 691 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 OTUD1Q5VV17 481 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 ARHGAP17Q68EM7 881 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 TXNDC8Q6A555 127 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 PMF1Q6P1K2 205 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 VWA1Q6PCB0 445 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 LCLAT1Q6UWP7 414 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MMS22LQ6ZRQ5 1243 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MON1BQ7L1V2 547 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 ENOSF1Q7L5Y1 443 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 RABEPKQ7Z6M1 372 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 PEG10Q86TG7 708 aaKnown RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 PIGZQ86VD9 579 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 UNC93AQ86WB7 457 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 ADGRG5Q8IZF4 528 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 CPA6Q8N4T0 437 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 CCDC33Q8N5R6 958 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MAB21L3Q8N8X9 362 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 IL17RCQ8NAC3 791 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 CCDC150Q8NCX0 1101 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 JOSD2Q8TAC2 188 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SCAMP5Q8TAC9 235 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MYCBPAPQ8TBZ2 947 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SYN2Q92777 582 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF419Q96HQ0 510 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SMAD5Q99717 465 aaKnown RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 VKORC1Q9BQB6 163 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 C11orf70Q9BRQ4 267 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 GTPBP2Q9BX10 602 aaKnown RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 THAP2Q9H0W7 228 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 LINC00597Q9H2U6 94 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SNX25Q9H3E2 840 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SLAMF7Q9NQ25 335 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 SEPT11Q9NVA2 429 aaKnown RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 DUS2Q9NX74 493 aaKnown RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 TRMT1Q9NXH9 659 aaKnown RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 CALCOCO1Q9P1Z2 691 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-204ENST00000463622 HECTD1Q9ULT8 2610 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 MYO6Q9UM54 1294 aa3.72□□□□□ -1.81
SCFD1-204ENST00000463622 KNTC1P50748 2209 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 E5RJQ4 531 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 F8VP50 259 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 SGK1O00141 431 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PAPSS1O43252 624 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 LCA5LO95447 670 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PTMAP06454 111 aaKnown RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PAEPP09466 180 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF883P0CG24 379 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 VDRP11473 427 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 TCF4P15884 667 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PPP3CBP16298 524 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 ABCB4P21439 1286 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 RRM1P23921 792 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 ITPKBP27987 946 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 CDH5P33151 784 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 AVPR1AP37288 418 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 TNFRSF4P43489 277 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PDE6CP51160 858 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 GALCP54803 685 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 GSDMDP57764 484 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 RPS7P62081 194 aaKnown RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 DSC2Q02487 901 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF33AQ06730 810 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PDCLQ13371 301 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 SMAD1Q15797 465 aaKnown RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF77Q15935 545 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms