RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 IGLV3-16A0A075B6K0 115 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 GOLGA6L10A0A0M3HER8 536 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 CCDC78A2IDD5 438 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 HEATR9A2RTY3 570 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 B4DGG1 531 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 TMEM63AO94886 807 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 ECEL1O95672 775 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 ZNF7P17097 686 aaPredicted RBP17.44■□□□□ 0.38
VPS52-214ENST00000463486 IVDP26440 423 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 NPY2RP49146 381 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 CAMK2BQ13554 666 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 SEPT6Q14141 434 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 SKIDA1Q1XH10 827 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 GPR33Q49SQ1 333 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 LRRTM4Q86VH4 590 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 TMPRSS12Q86WS5 348 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 ARL14Q8N4G2 192 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 NAT14Q8WUY8 206 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 NAT6Q93015 286 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 TIMM29Q9BSF4 260 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 CHRAC1Q9NRG0 131 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 KCNK6Q9Y257 313 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 RNF215Q9Y6U7 377 aa17.44■□□□□ 0.38
VPS52-214ENST00000463486 CCDC162PA2VCL2 907 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 FAM149AA5PLN7 773 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 OR51F1A6NGY5 319 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 KMOO15229 486 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 NUDT21O43809 227 aaKnown RBP17.43■□□□□ 0.38
VPS52-214ENST00000463486 AVILO75366 819 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 GLB1P16278 677 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 MAZP56270 477 aaKnown RBP17.43■□□□□ 0.38
VPS52-214ENST00000463486 SESN2P58004 480 aaPredicted RBP17.43■□□□□ 0.38
VPS52-214ENST00000463486 CRADDP78560 199 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 NR1D2Q14995 579 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 PCID2Q5JVF3 399 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 IYDQ6PHW0 289 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 CRTC3Q6UUV7 619 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 ZNF438Q7Z4V0 828 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 SFRP1Q8N474 314 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 DCBLD1Q8N8Z6 715 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 NAT8LQ8N9F0 302 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 GDAP1Q8TB36 358 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 GATA6Q92908 595 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 CCDC74AQ96AQ1 378 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 CCDC3Q9BQI4 270 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 KLC4Q9NSK0 619 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 TREX1Q9NSU2 369 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 RNF14Q9UBS8 474 aa17.43■□□□□ 0.38
VPS52-214ENST00000463486 DMXL2Q8TDJ6 3036 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 A0A1W2PQM1 296 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 NTN3O00634 580 aaPredicted RBP17.42■□□□□ 0.38
VPS52-214ENST00000463486 PPM1DO15297 605 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 CAPNS1P04632 268 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 PNLIPP16233 465 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 ITGALP20701 1170 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 FOXN2P32314 431 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 PTK6Q13882 451 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 HES3Q5TGS1 186 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 TMEM220Q6QAJ8 160 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 NLRP9Q7RTR0 991 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 SERPINA9Q86WD7 417 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 AGGF1Q8N302 714 aaeCLIP17.42■□□□□ 0.38
VPS52-214ENST00000463486 GALNT15Q8N3T1 639 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 MCUQ8NE86 351 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 OR6C4Q8NGE1 309 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 MAPK15Q8TD08 544 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 GRK7Q8WTQ7 553 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 PEX13Q92968 403 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 HDAC10Q969S8 669 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 ULK4Q96C45 1275 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 SGF29Q96ES7 293 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 SGSM3Q96HU1 749 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 KIFC1Q9BW19 673 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 IL22Q9GZX6 179 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 PRDM8Q9NQV8 689 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 EVA1BQ9NVM1 165 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 SCHIP1Q9P0W5 487 aaPredicted RBP17.42■□□□□ 0.38
VPS52-214ENST00000463486 LRIT1Q9P2V4 623 aa17.42■□□□□ 0.38
VPS52-214ENST00000463486 MAP1BP46821 2468 aaKnown RBP17.41■□□□□ 0.38
VPS52-214ENST00000463486 OR2AG2A6NM03 316 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 B4GAT1O43505 415 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 POP7O75817 140 aaKnown RBP17.41■□□□□ 0.38
VPS52-214ENST00000463486 GAS8O95995 478 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 MT-CO3P00414 261 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 BRAFP15056 766 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 ACRV1P26436 265 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 MGAT1P26572 445 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 MAGEA3P43357 314 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 TERF1P54274 439 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 CACNG1Q06432 222 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 DMPKQ09013 629 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 TARDBPQ13148 414 aaKnown RBP eCLIP17.41■□□□□ 0.38
VPS52-214ENST00000463486 LAMB3Q13751 1172 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 DBN1Q16643 649 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 PLA2G4EQ3MJ16 856 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 ZNF658BQ4V348 819 aaPredicted RBP17.41■□□□□ 0.38
VPS52-214ENST00000463486 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.41■□□□□ 0.38
VPS52-214ENST00000463486 RNASEH2BQ5TBB1 312 aaKnown RBP17.41■□□□□ 0.38
VPS52-214ENST00000463486 SYT10Q6XYQ8 523 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 FAM83HQ6ZRV2 1179 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms