RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PRDX6P30041 224 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 INHBCP55103 352 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 CLCQ05315 142 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 GDPD4Q6W3E5 623 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 USP45Q70EL2 814 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 DEFB107AQ8IZN7 70 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 RBFAQ8N0V3 343 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 AHI1Q8N157 1196 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 NXPE1Q8N323 547 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 STON2Q8WXE9 905 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.67□□□□□ -0.38
VAPB-203ENST00000463370 APOL5Q9BWW9 433 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 TUBB1Q9H4B7 451 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 PACSIN3Q9UKS6 424 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 TMPRSS11EQ9UL52 423 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 RGSL1A5PLK6 1076 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 AIM2O14862 343 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 LEFTY1O75610 366 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
VAPB-203ENST00000463370 RPS3P23396 243 aaKnown RBP eCLIP12.67□□□□□ -0.38
VAPB-203ENST00000463370 NRIP1P48552 1158 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 B4GALNT1Q00973 533 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 SHHQ15465 462 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 TGFBIQ15582 683 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 GRAMD4Q6IC98 578 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 RIPOR1Q6ZS17 1223 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 CHSY3Q70JA7 882 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 RAB44Q7Z6P3 723 aaPredicted RBP12.67□□□□□ -0.38
VAPB-203ENST00000463370 GPSM1Q86YR5 675 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 CBARPQ8N350 705 aaPredicted RBP12.67□□□□□ -0.38
VAPB-203ENST00000463370 DCBLD1Q8N8Z6 715 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 ACTRT2Q8TDY3 377 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 C19orf60Q96EN9 201 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 FAR2Q96K12 515 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 MTIF3Q9H2K0 278 aaKnown RBP12.67□□□□□ -0.38
VAPB-203ENST00000463370 DUS2Q9NX74 493 aaKnown RBP12.67□□□□□ -0.38
VAPB-203ENST00000463370 PCDHB1Q9Y5F3 818 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 COMMD10Q9Y6G5 202 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 SYCE1LA8MT33 242 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 AGAP14A8MT82 685 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 ZNF197O14709 1029 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 ANP32DO95626 131 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 CISD3P0C7P0 127 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 SATB1Q01826 763 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 SBSNQ6UWP8 590 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 GK5Q6ZS86 529 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 LARP4Q71RC2 724 aaKnown RBP eCLIP12.66□□□□□ -0.38
VAPB-203ENST00000463370 SFTPA1Q8IWL2 248 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 CLYBLQ8N0X4 340 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 RCN3Q96D15 328 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 ZNF641Q96N77 438 aaPredicted RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 RTKNQ9BST9 563 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 EIF2B4Q9UI10 523 aaKnown RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 FBXO10Q9UK96 956 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 PCTPQ9UKL6 214 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 ADAMTS6Q9UKP5 1117 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 BTRCQ9Y297 605 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 TIMM22Q9Y584 194 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 SOBPA7XYQ1 873 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 WASH3PC4AMC7 463 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 PIP5K1BO14986 540 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 ALDOCP09972 364 aaKnown RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 TCF3P15923 654 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 NUDT2P50583 147 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 LCP2Q13094 533 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 CYLC2Q14093 348 aaPredicted RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 DMC1Q14565 340 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 FAM78AQ5JUQ0 283 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 KANK2Q63ZY3 851 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 NAIF1Q69YI7 327 aaPredicted RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 ARHGAP24Q8N264 748 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 CELF5Q8N6W0 485 aaKnown RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 ENDOVQ8N8Q3 282 aaKnown RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 DTX3LQ8TDB6 740 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 DLG3Q92796 817 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 PBXIP1Q96AQ6 731 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
VAPB-203ENST00000463370 AKTIPQ9H8T0 292 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 CD274Q9NZQ7 290 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 GNPTGQ9UJJ9 305 aa12.66□□□□□ -0.38
VAPB-203ENST00000463370 ANTXRLA6NF34 631 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 AZIN1O14977 448 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 FGF4P08620 206 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 THRAP10827 490 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 ADH5P11766 374 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 GNAZP19086 355 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 SLC6A11P48066 632 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 METAP1P53582 386 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 ERVK-21P61565 698 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 RCN1Q15293 331 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 ANKS6Q68DC2 871 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 PGM2L1Q6PCE3 622 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 SYVN1Q86TM6 617 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 HPS6Q86YV9 775 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 NPAS3Q8IXF0 933 aa12.65□□□□□ -0.38
VAPB-203ENST00000463370 OR9I1Q8NGQ6 314 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms