RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00960-201ENST00000463183 PCDHGA8Q9Y5G5 932 aa17.73■□□□□ 0.43
LINC00960-201ENST00000463183 IGHV1OR21-1A0A087WYE8 117 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 C5orf60A6NFR6 353 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 CCL22O00626 93 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 KMOO15229 486 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 DXOO77932 396 aaKnown RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 PRAMEF1O95521 474 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 IFNB1P01574 187 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 F3P13726 295 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 HOXB3P14651 431 aaPredicted RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 TPH1P17752 444 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 LPOP22079 712 aaPredicted RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 RPL10P27635 214 aaKnown RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 CD1CP29017 333 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 PBLDP30039 288 aaPredicted RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 GPR3P46089 330 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 DRG2P55039 364 aaKnown RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ERVPABLB-1P60509 514 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SNX1Q13596 522 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ITGA9Q13797 1035 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SEPT6Q14141 434 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 TAF1AQ15573 450 aaPredicted RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 GPRC6AQ5T6X5 926 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 IYDQ6PHW0 289 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SLC9B2Q86UD5 537 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 PDZD3Q86UT5 571 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SLITRK4Q8IW52 837 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 TRIM48Q8IWZ4 208 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SPACA3Q8IXA5 215 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 OR13C4Q8NGS5 318 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SLC35B2Q8TB61 432 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 C1orf54Q8WWF1 131 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 CCDC74BQ96LY2 380 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 TMEM9Q9P0T7 183 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 FAM8A1Q9UBU6 413 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 NBEAQ8NFP9 2946 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 GOLGA6L3A6NEY3 463 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 OR2AG2A6NM03 316 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 CHUKO15111 745 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 KLK10O43240 276 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 NRDCO43847 1150 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 CRTAMO95727 393 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SLC2A4P14672 509 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 CSF2RBP32927 897 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ZFP36L1Q07352 338 aaKnown RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 EIF3IQ13347 325 aaKnown RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 C16orf72Q14CZ0 275 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 PARP6Q2NL67 630 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SLC13A5Q86YT5 568 aaPredicted RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ZNF547Q8IVP9 402 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ZNF398Q8TD17 642 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 PPP1R2P1Q96PQ5 205 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 CMKLR1Q99788 373 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ZCCHC2Q9C0B9 1178 aaKnown RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 FAM96AQ9H5X1 160 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ASB8Q9H765 288 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 AKAP7Q9P0M2 348 aaPredicted RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 SCHIP1Q9P0W5 487 aaPredicted RBP17.72■□□□□ 0.43
LINC00960-201ENST00000463183 KLHL3Q9UH77 587 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 ZNF148Q9UQR1 794 aa17.72■□□□□ 0.43
LINC00960-201ENST00000463183 IGHV5-10-1A0A0J9YXX1 117 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 CCDC78A2IDD5 438 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 A6NCN8 305 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 A8MU76 341 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 GPR89AB7ZAQ6 455 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 GAPDHSO14556 408 aaPredicted RBP17.71■□□□□ 0.42
LINC00960-201ENST00000463183 ZNF189O75820 626 aaPredicted RBP17.71■□□□□ 0.42
LINC00960-201ENST00000463183 ITGA2BP08514 1039 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 GPR89BP0CG08 455 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 MSH3P20585 1137 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 FASLGP48023 281 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 LMAN1P49257 510 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 CTSCP53634 463 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 CCZ1BP86790 482 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 CCZ1P86791 482 aaPredicted RBP17.71■□□□□ 0.42
LINC00960-201ENST00000463183 GSE1Q14687 1217 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 NR1D2Q14995 579 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 LDLRAP1Q5SW96 308 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 MEI1Q5TIA1 1274 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 TMEM220Q6QAJ8 160 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 ZNF574Q6ZN55 896 aaPredicted RBP17.71■□□□□ 0.42
LINC00960-201ENST00000463183 MICALCLQ6ZW33 695 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 PRUNE1Q86TP1 453 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 RASGEF1AQ8N9B8 481 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 OR10G6Q8NH81 332 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 BRSK1Q8TDC3 778 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 NCSTNQ92542 709 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 TIMM29Q9BSF4 260 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 TBC1D10AQ9BXI6 508 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 SARS2Q9NP81 518 aaKnown RBP17.71■□□□□ 0.42
LINC00960-201ENST00000463183 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.71■□□□□ 0.42
LINC00960-201ENST00000463183 CPNE7Q9UBL6 633 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 CRLS1Q9UJA2 301 aa17.71■□□□□ 0.42
LINC00960-201ENST00000463183 PTPRQQ9UMZ3 2332 aa17.7■□□□□ 0.42
LINC00960-201ENST00000463183 KIR2DS5A0A0G2JLQ3 304 aa17.7■□□□□ 0.42
LINC00960-201ENST00000463183 A0A0G2JNG1 304 aa17.7■□□□□ 0.42
LINC00960-201ENST00000463183 KIR2DS3K7RE56 304 aa17.7■□□□□ 0.42
LINC00960-201ENST00000463183 DUX1O43812 170 aa17.7■□□□□ 0.42
LINC00960-201ENST00000463183 PPFIA2O75334 1257 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms