RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 XPNPEP2O43895 674 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 E2F6O75461 281 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 HAPLN1P10915 354 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-208ENST00000463007 THPOP40225 353 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 TM4SF4P48230 202 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SELPLGQ14242 412 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SPCS2Q15005 226 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 PTPRRQ15256 657 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 TSNQ15631 228 aaKnown RBP12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SPESP1Q6UW49 350 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-208ENST00000463007 KIAA2013Q8IYS2 634 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 LINC01599Q8WXQ3 324 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ELMO1Q92556 727 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 CASP10Q92851 521 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 TMBIM1Q969X1 311 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 FCRL5Q96RD9 977 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 CSF3RQ99062 836 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SEZ6LQ9BYH1 1024 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 KLHL25Q9H0H3 589 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 NMUR1Q9HB89 426 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ARMC1Q9NVT9 282 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 GALPQ9UBC7 116 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 CDC7O00311 574 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 DNAJB2P25686 324 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 HK2P52789 917 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ACAP2Q15057 778 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 KCNA10Q16322 511 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 PAGE2BQ5JRK9 111 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 C6orf183Q5T699 404 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 OVOS1Q6IE37 1185 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 CRTC3Q6UUV7 619 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 NCLNQ969V3 563 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 CCDC126Q96EE4 140 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 MYRFLQ96LU7 910 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ZIC5Q96T25 663 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ADAM2Q99965 735 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 THUMPD3Q9BV44 507 aaKnown RBP12.32□□□□□ -0.44
HDAC4-208ENST00000463007 TRIM62Q9BVG3 475 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 NOL6Q9H6R4 1146 aaKnown RBP12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ENTPD7Q9NQZ7 604 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ACTR3BQ9P1U1 418 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 AXIN1O15169 862 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 GPR39O43194 453 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SERPINB7O75635 380 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 C1RP00736 705 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 RFC2P35250 354 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ATP6V0D1P61421 351 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 HERVK_113P63132 956 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SLC22A9Q8IVM8 553 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 OR13J1Q8NGT2 312 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 FATE1Q969F0 183 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 PSMG2Q969U7 264 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SLC39A13Q96H72 371 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 HEPHQ9BQS7 1158 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ERVK-6Q9BXR3 956 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 NANOGQ9H9S0 305 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 SP110Q9HB58 689 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 NMRK2Q9NPI5 230 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ABCC13Q9NSE7 274 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
HDAC4-208ENST00000463007 FGF10O15520 208 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-208ENST00000463007 HS6ST1O60243 411 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 RHOBTB1O94844 696 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 INMTO95050 263 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 RASAL1O95294 804 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 TBX18O95935 607 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 GRIK1P39086 918 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 NKX2-5P52952 324 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-208ENST00000463007 MBTPS1Q14703 1052 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 MAPRE1Q15691 268 aaKnown RBP12.31□□□□□ -0.44
HDAC4-208ENST00000463007 PAQR3Q6TCH7 311 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 NEURL2Q9BR09 285 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 RAD21L1Q9H4I0 556 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 ATP13A1Q9HD20 1204 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 TREX1Q9NSU2 369 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 IL37Q9NZH6 218 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 LIMD1Q9UGP4 676 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 BTN3A1O00481 513 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 GSTA4O15217 222 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 CA12O43570 354 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 OAZ2O95190 189 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 CCND3P30281 292 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-208ENST00000463007 IDUAP35475 653 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 TGFBR1P36897 503 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 MTHFRP42898 656 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 FLT3LGP49771 235 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 PLA2G16P53816 162 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 DNAJB13P59910 316 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 CLCQ05315 142 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 IHHQ14623 411 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 C18orf21Q32NC0 220 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-208ENST00000463007 MFSD14CQ5VZR4 134 aa12.31□□□□□ -0.44
HDAC4-208ENST00000463007 TMEM236Q5W0B7 351 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms